Volvox carteri f. nagariensis: VOLCADRAFT_60063
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Entry
VOLCADRAFT_60063 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_60063
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VOLCADRAFT_60063
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
90S particles
Helicases
VOLCADRAFT_60063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9619507
NCBI-ProteinID:
XP_002950112
JGI:
60063
UniProt:
D8TUW1
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSGDNKKRKKIQQTHTQKRQGRRSYKEDLEIAQLEQQIKDGAPPRGSNPLAAPERQDAGA
STSYAGARTFDDLPMSQYTKDGLKKAKYVTLTAIQRAALPHALCGRDILGAAKTGSGKTL
AFLIPLVEKLYRLKWTRLDGLGALVLTPTRELAVQIFEQLQKVGHFHDLSAGLLIGGKNV
QEEVLRVSAMNILVCTPGRLLQHMDETPGFDTSSLQLLVLDEADRILDMGFAATMDAIVA
NLPRERQTMLFSATQTKSVRDLARLSLTQPEYLAVHAEAAAPTPVKLQQAYMVVELGQKM
DVLWSFIKSHLKAKTIVFLSTCKQVRFVFEAFRKLRPGVPLRCLHGGMKQPKRTGVFYEF
CNAQAMVLIATDIAARGLDFPTVDWVVQADCPEDAATYIHRVGRTARYLSSGRALLLLLP
SERDAMLAALTEAKVPLTQIKPNPAKQQSVSPALQALLSKDQELKDFAQKALVSYLRSVF
LQPRKDVFNVSALPAGDLAASLGLASVPRLRFLRRGRKGGEEVVEVAGKEALQEEEEEEE
EEEVEDGKEEEEDAGGGRSEKKRRRLNDSPAAAGGFRGVDGGGKVEEEEEEDDFLVVKKR
DVFSEPLGVRQKGEGEGEGYAVKS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagacaataagaagagaaagaaaatacaacaaacgcatacgcagaagcggcag
gggcggcgttcatacaaggaggaccttgagattgctcagttggagcaacaaatcaaggat
ggcgcgccgccgcgaggttctaaccccttggcggcgcctgagcggcaggatgccggcgca
tcgacatcttatgccggcgcacggacattcgacgacctgcctatgtcacagtacacaaag
gacggcctgaaaaaagcaaaatacgtcacgcttacagcgattcagcgcgctgcgctgccg
catgcgttgtgcggtcgcgacatccttggtgctgccaagacgggctcgggtaaaacgtta
gccttcctcatcccgttagttgagaagctgtatcggctcaagtggaccaggcttgacgga
ctcggcgctctggtgctgacccccactcgagagctggcggtgcagattttcgagcagctg
cagaaggtgggccacttccacgacctgtctgcgggtttgttgattggcggcaagaacgtg
caggaggaggtgctgagagtgtcggccatgaacatcctcgtgtgcacccccggtcgcctg
ttacagcacatggacgagacgccgggtttcgacacgtcatctctgcagttgcttgtattg
gacgaggctgatcgaattctcgatatgggtttcgcggccacaatggatgccatcgtggcc
aacttgccccgggagaggcaaaccatgctgttcagcgccacgcagacaaagtccgttcgc
gacctggcgcgtctaagcctcacacagcccgagtatcttgcggtacatgcggaagcggcc
gcaccgacgccggtgaagctgcagcaggcctacatggtggtggagttgggtcaaaagatg
gacgtcttgtggtccttcatcaagtcgcatctgaaagccaaaaccatcgtgtttctgtcc
acttgcaaacaggtgcggttcgtgttcgaggcgttccgcaagctgcgtcccggcgtcccc
ctccgctgcctccacgggggcatgaagcaacccaagcgcaccggcgtgttttacgagttc
tgcaacgcgcaggccatggttctcatcgccacggacatcgccgcccgggggttggacttc
cccaccgtggactgggtcgtacaggctgactgtccggaggacgccgccacgtacatacac
cgtgtgggtcgtacagcccgctacctctcctcggggcgggcgctactgctgctactgccc
tcagagcgagatgccatgctggccgccctcaccgaggccaaggttccgctgacccagatc
aagcccaaccccgccaagcagcagtcagtcagtcccgcactgcaggcgctgctgtccaag
gaccaggaactcaaggatttcgcccagaaggctctggtgtcgtaccttcgctccgtcttc
ctgcaaccgcgcaaggacgtgttcaacgtgtcggcgctgcccgcgggtgatctggcggcc
tccctgggccttgcatccgtaccccgcttgcggttcttgaggcgaggacggaaggggggg
gaggaggtggtggaggtggcgggtaaggaggcgctgcaggaggaggaggaggaggaggag
gaggaggaagtggaagacggcaaggaggaggaggaggacgcggggggtggacgcagcgag
aagaagcggcgacgattgaacgactccccggcggcggctggtggctttaggggtgttgac
gggggtggcaaagtggaggaggaggaggaggaggacgacttcctggtggtgaagaaacgc
gatgtgttttctgagccactaggtgtacggcagaaaggcgaaggtgagggagaaggttat
gcggtaaagagttaa
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