Volvox carteri f. nagariensis: VOLCADRAFT_61661
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Entry
VOLCADRAFT_61661 CDS
T01330
Symbol
npsn1
Name
(RefSeq) Qb-SNARE, NPSN-family
KO
K08494
novel plant SNARE
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_61661 (npsn1)
Membrane trafficking [BR:
vcn04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
VOLCADRAFT_61661 (npsn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
DUF5339
Sec20
V-SNARE
Laminin_II
Pex24p
Fib_alpha
DNA_repr_REX1B
EzrA
PhaP_Bmeg
DUF6818
NPV_P10
Retrotran_gag_4
DUF3801
Motif
Other DBs
NCBI-GeneID:
9615910
NCBI-ProteinID:
XP_002951827
JGI:
61661
UniProt:
D8TZH7
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MPPKAAKEESPPPQEEIVFERTEYEEQCDRIFKDLDRAFKKLHKTSKPDKIHAQIKDITN
KLKEAKSLIKDFEREARADGMPASELTARKRAMAAELNGFIEMKKQFAQNEGNKGDLLSG
AQAGERNGYCIHVDLVVCGHLAACYAAMSMQQLMSKGRKDIADIDKTLDRAQRIAEDTKQ
VGVALGQTLNDQTKKMEDIVDQLNEIEFTMKKATQIIRDITRGLLTDKCIAFLLLLVVLG
VVAIIVIKIINPNRKKVQEGAQAIISNVTSAINSTDVGSTITSKVTNTVNGILNNGSSSS
SSAGRRMLAQKVLLHALELNATL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaagcggctaaagaggagtctccgcctccacaggaggaaatagtttttgag
cggacggagtatgaggagcaatgtgaccgaatattcaaggacttggaccgggcttttaag
aaactacataaaacatcaaaaccggataagatacatgcacagatcaaggatattaccaac
aagcttaaggaggcgaagtcgcttatcaaggactttgagcgggaggcacgcgcggatggg
atgccagccagcgagcttaccgctcgcaaacgggccatggcagcagagcttaacggcttt
atcgagatgaagaagcagtttgcgcagaatgaggggaataagggtgacctcctgagtggt
gctcaagctggagaacgcaatggctattgtattcatgtggatcttgtggtatgcggacac
ctcgctgcctgctatgcagccatgtccatgcagcagctgatgagtaaggggcgaaaggac
atcgcggatatcgacaagacgctggaccgggcccagcgaatcgctgaggacaccaagcaa
gtgggcgtcgcgcttgggcaaacgctaaacgaccagacgaagaaaatggaggacattgtg
gaccagctgaatgaaatcgagttcacaatgaagaaggccacacagatcatccgcgatatc
acgcgtggcctcctcacagacaagtgcatcgcgtttctgctgcttctggtcgtactgggt
gtcgtggcgatcatcgttatcaagatcattaatcccaaccggaaaaaggtccaggagggc
gcgcaggcgatcatctctaacgtcacctcggcgattaacagcaccgacgtaggcagcaca
atcaccagcaaagtcaccaatacggtcaacggcatcttgaacaacggtagcagcagcagt
agcagcgcgggcaggcggatgctggcgcagaaggtgcttcttcacgcgcttgagcttaat
gcgacgttgtag
DBGET
integrated database retrieval system