KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_61695
Entry
VOLCADRAFT_61695  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03020  RNA polymerase
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VOLCADRAFT_61695
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_61695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_61695
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_61695
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VOLCADRAFT_61695
  RNA polymerase III system
   RNA polymerase III
     VOLCADRAFT_61695
  RNA polymerase I system
   RNA polymerase I
     VOLCADRAFT_61695
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VOLCADRAFT_61695
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_ribbon_LysW Zn_Ribbon_YjdM CoiA_N Prok-RING_1 C1_1 DUF1451 Zn_ribbon_13 DZR At4g08330 Zn_ribbon_NUD A2L_zn_ribbon DUF5816 Zn_ribbon_DZR_6 HypA
Other DBs
NCBI-GeneID: 9615909
NCBI-ProteinID: XP_002951731
JGI: 61695
UniProt: D8TZH5
LinkDB
Position
Unknown
AA seq 58 aa
MSGYGATPATVTTGVPYICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atgagcggttacggcgctacgccagcaactgtgacaaccggagttccttacatctgcggg
caatgcggctctgagattagccttaagccgggagacatcatacaatgtcgagagtgcggt
tatcgcattctatacaagaagcggacgaacaaggtggtgcagtttgaagcgcgataa

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