Volvox carteri f. nagariensis: VOLCADRAFT_62320
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Entry
VOLCADRAFT_62320 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K24729
cilia- and flagella-associated protein 57
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_62320
Cilium and associated proteins [BR:
vcn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
VOLCADRAFT_62320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_EML
Beta-prop_WDR5
CFAP251_N
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
DUF5711
HELP
Beta-prop_IFT80_2nd
Beta-prop_WDR19_1st
DUF6275
CFAP43_N
PAC11
Motif
Other DBs
NCBI-GeneID:
9628564
NCBI-ProteinID:
XP_002952233
JGI:
62320
UniProt:
D8U0V7
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
YIFGFRADVKDNVHYAEDGSVVYPAGHNVVLYSPDTRTQRLIPGTLESEGITALCVSSNK
KLLAVAERSDKAMISVYDMQTLKRRKVLVSSDAGSKEYVSLSFSGDGKMLIGQGGAPEYN
LVLWLWEKSKVASVVKTTNQQGAPMYSCDFSHGDSSLVGVIGQGIFKMFRNADSGLKQAN
PIIGKRDPSLASCQVGCQRERLLLGMADGEVLLLEVGCMCFPTPPHPTSPPPNSHLPITT
RNPEPPISQPPPPPAIPRYPQSSPLQGTDLKAAFSCDNGLPACSIAVYSKGFVVGQDQGV
VTIFERDDKEFYRRARAFTIEGNPCKVLNLAISPNEEHLVASLDNNQAYTLMLSNQEIMK
HDEMNFEILGTPNHAGPVTGLDVCVRKALIASCCSTDRSVRLWNWVDRTCELHRTFADEI
FSIAIHPTGLMILVGFADKLRLMSVLMEDLKTIKELGIKGCRECCFSTGGQYFAAVNGTT
ISIYNTYTCDNVGNLRGHNGKVRCRVGSSH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
tacatcttcggcttccgagcggacgtcaaagacaatgtccactacgcggaggacggctcg
gtcgtgtatccggccgggcacaatgtggtgctatactcacccgacacgcgcacccagcgc
ctcataccgggcacactggagagcgagggcatcaccgccctctgcgtctcctccaacaaa
aagctgctggccgtggcggagcgctcggacaaggccatgattagcgtctacgacatgcag
acgctgaagcggcggaaggtgctcgtctcctcagatgccggctccaaggagtacgtgagc
ctgtctttcagcggcgatggcaagatgctgatcggccagggcggtgcgcccgagtataac
ttggtgctatggttgtgggagaagagcaaggtggccagtgtggtcaaaaccaccaaccag
caaggggcgcccatgtacagctgcgacttttcgcacggggactcctctctggttggcgtt
atcggccagggcatcttcaagatgtttcgtaacgccgacagcggtctgaagcaggccaac
cccatcattggcaagcgggacccctccctggcgtcatgtcaggtgggttgccaacgtgag
cggctgctgctgggaatggcggatggggaggtgctgctgctggaggtgggttgcatgtgt
tttccaaccccaccccaccccacctcgccgcccccgaactcccacctccccataaccacc
cgcaacccggaacccccaatttcccaaccccctcccccccccgctatcccgcgctacccc
caatcctcacctctacagggcacagacctgaaggccgccttctcctgcgacaacggcctg
cccgcctgctccatcgccgtctactccaagggctttgtggtgggacaggaccagggcgtg
gtgaccatctttgagcgagacgacaaggagttctaccgccgtgcgagggccttcaccatc
gaggggaatccctgcaaagtgcttaatttggccatctccccgaatgaggagcacctggtg
gcctccctggacaacaaccaggcctacacgctgatgctgagtaaccaggagatcatgaaa
cacgacgaaatgaactttgagatcctgggcacccccaaccacgccggtcctgtgacgggt
ttggacgtgtgcgtgcgtaaggccctcatcgcctcgtgctgctccaccgatcgctctgta
cggctgtggaactgggtggatcgtacatgcgagctgcaccgtacatttgcggacgagatc
ttctccatcgccatacaccccacgggccttatgattcttgtgggattcgctgacaagctg
cgtctgatgtccgtgttgatggaggatctgaagaccatcaaagagctgggcatcaagggg
tgcagggagtgctgcttctccaccggcggacagtactttgccgccgtcaacggcaccacc
atctccatctacaacacctacacctgcgataacgtgggcaatttgaggggccacaacggc
aaggtacgttgtcgtgtgggctctagtcattga
DBGET
integrated database retrieval system