Volvox carteri f. nagariensis: VOLCADRAFT_62618
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Entry
VOLCADRAFT_62618 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VOLCADRAFT_62618
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcn01007
]
VOLCADRAFT_62618
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_62618
Enzymes [BR:
vcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VOLCADRAFT_62618
Amino acid related enzymes [BR:
vcn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VOLCADRAFT_62618
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VOLCADRAFT_62618
Prokaryotic type
Other AARSs
VOLCADRAFT_62618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF6187
Motif
Other DBs
NCBI-GeneID:
9627534
NCBI-ProteinID:
XP_002952571
JGI:
62618
UniProt:
D8U1I6
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
SPEEIRDVRLKKVQDLRGLGQEPYAYGFDRTHFTKDLQDLYASLPNGAEDEAGTLVAVAG
RVLAKRVMGKLAFLSLRDDKGQIQLYVDRTRLDASQNEGFNTVKGLVDVGDIVGCSGTVK
RTEKGELSVVATGMQVLTKSLLPLPDKWHGLSDVEKRYRQRYLDLIMTAEVRDTFRARSR
IISTLRRQLEDRGFIEVETPVLESVAGGADARPFRTFHNSLGRDLTLRIATELHLKRMVV
GGFERVFELGRVFRNEGLSSRHNPEFTSVEIYQAYADYNDMMNLTEELIRVCAMEVRGSA
QVSYQGVAIDFSQPFRRVTMADLVREACGLDFEAAMAAARQVGSAEAAAAVRSAPSLGHL
LNEMFEAVGEAGLVQPTFVLEHPVEISPLAKPHRSKPGVTERFELFIYGREHANAFSELT
DPVDQRARFEAQVARHNAAFQERQKVALDTDFIAALEYGMPPTGGLGIGVDRLVMLLTDS
PSIRDVIAFPTMS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
tctccagaggaaattcgcgacgtccgattgaaaaaggttcaagatcttcgcgggctgggt
caagaaccatatgcatatgggttcgaccgcacgcatttcacgaaagacttgcaggacctg
tacgcctctctacccaatggcgctgaggatgaggcaggcacgctggtggccgtggcgggg
cgagtgcttgccaaacgggtgatgggcaaattggcgttcctcagcctgcgggatgacaag
ggacagattcagctctacgtggatcgcacccggctggatgcttcccagaacgagggcttc
aacaccgtcaaggggctggtggatgtgggcgacatagtgggctgctccggaaccgtgaag
cgcacggagaaaggggagctgtctgtggtggccaccggcatgcaggtgctgacgaagtct
ttgttgcccctcccggacaaatggcacggactgtccgatgtggagaagcgctaccgccag
aggtacctggacctcatcatgacggctgaggttcgtgacacattccgagcccgctcccgc
atcatctccactttgcggcggcagctggaggaccggggcttcattgaggttgagacgccc
gtgttggagtcagttgctggcggtgcggacgcgaggcccttccgcaccttccacaactcc
ctgggccgggacctgacactgcgcatcgccacggagctgcacctgaaaaggatggtagta
ggcggattcgaacgggtgttcgagctgggccgcgtgttccgcaacgaggggctctccagc
cgccataaccccgagtttacatcagtcgagatttaccaggcatatgccgactacaatgac
atgatgaacctgactgaggagctgatccgggtgtgtgcaatggaggtccggggctcggca
caggtgtcatatcagggcgtggctattgatttctcccagcctttccgccgcgtcaccatg
gcggatctggttcgtgaggcgtgcgggctcgactttgaagccgcgatggcggccgctcgt
caggtgggcagcgccgaggcggctgcagcggtccgctccgcgccctccctcggccacttg
cttaatgagatgtttgaggcggtgggcgaggcgggtttggtgcagcccaccttcgtgctg
gagcacccggtggagatttccccgctggccaagccacacagatccaaaccgggggtcacg
gagaggtttgagctcttcatctacggtcgcgagcacgccaacgccttctccgagctgact
gacccggtggaccagcgggccaggttcgaggcccaggtggcaagacacaacgctgcattt
caggagcggcaaaaggtggctctggacacggatttcatcgcggcactcgagtacggcatg
ccgccgactggaggccttggcatcggagtggaccggctggtaatgctgctcacggacagt
ccgtccattcgcgatgttatcgccttccccaccatgagctga
DBGET
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