Volvox carteri f. nagariensis: VOLCADRAFT_63413
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Entry
VOLCADRAFT_63413 CDS
T01330
Name
(RefSeq) class II photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_63413
Enzymes [BR:
vcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VOLCADRAFT_63413
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VOLCADRAFT_63413
Prokaryotic type
VOLCADRAFT_63413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
9622400
NCBI-ProteinID:
XP_002953304
JGI:
63413
UniProt:
D8U3Z0
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MSSKRKAEAEPASPGAGPLTKKPATSAAAVALVNPKRIRVLKEGTIGNGPVVFWMSRDQR
IEDNWALLHAIEVAQQNHRQQSAAASSGGGGSSSSSSSEPQVAVAFNLVPAFLGAGARQF
GFMLRGLRELQPKLEAKGIAFFLLKGDPARTLPDLVTRLGAGLLVTDYSPLRLGRQWREQ
VCSSVPVPVHEVDAHNVVPVWVASDKREVGARTLRPKIHKHLPEFLTDFPEVPQLPPWSH
EVKPEPVNWETLLEEVLTRGSAVPEVDWCKPGEDAALQALQGPAGFLSSTRLSLYDSKRN
DPATPRALSNLSPYLHFGQLAPQRAALEAAKHRAKFKAAVESFLEELVVRRELSDNFCHY
TPNYDSLACAAEWARETLEKHRGDKREFLYTREQLEAGRTHDELWNACQWEMVHVGKMHG
YMRMYWAKKILEWTPGPEEAIEIAIYLNDRYELDGRDPSGYVGVMWSMAGIHDMGWTERP
IFGKIRYMNYNGCKRKFDIKAYCAYVDRLVGEVRAKQRAKAKATAAAGSGAEAAADNEAP
VAAAAAAGVEGKSGAGGSGELAQSSKKAGKKSSEVGSSKGTGQRKAGAT
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagcgcaaggccgaggcggagcccgcctcaccaggcgctgggccattaacc
aaaaagccggcgacatctgccgccgctgtcgcactggtcaacccaaagcgtatacgcgtg
ctcaaggagggaaccatcggcaacggtcctgtcgttttttggatgtcccgcgaccagcgc
atagaggacaactgggcactgctgcatgccattgaggtggcgcaacaaaaccaccggcaa
caatctgcggctgccagcagcggtggcggaggtagcagcagcagtagcagcagcgagcct
caggtcgcggtggcgttcaacctggttcctgccttcctgggtgcgggtgcccggcagttc
gggttcatgctgcggggcctgagggagctccagcccaaactcgaggccaaggggatcgcc
ttcttcctgctcaagggtgaccccgcccggacgttgcctgatttggtaacccggctgggt
gctggtctgctggtgacggactactccccactgaggctgggccggcagtggagggagcag
gtgtgttcctccgtaccggtgccggtccacgaggtagatgcgcacaacgtggtgcccgtg
tgggtggccagtgacaagagggaggtgggggcgaggacgctcagacccaagatacacaaa
cacctgccggagttcctcacggacttcccggaggtgccccagctgcccccctggagtcat
gaggtgaagccggagccagtgaactgggagactttgttggaggaggtgctgacccgcggg
tcggcagtgcccgaggtggactggtgcaaaccgggtgaggacgcggcccttcaggcgctc
caaggtcccgccggcttcctcagctccacccggctcagcctgtacgacagcaaacgcaac
gacccggccaccccgcgcgcgttgtccaacttgtcgccgtacttgcactttgggcagctg
gccccgcagcgggcggctctggaggcagccaagcaccgggcaaagttcaaggccgccgtg
gagtcattccttgaggaactggttgtacggcgggaattgtcggacaacttctgtcactac
acgcccaactacgactctctggcctgcgcggcggagtgggcgcgggagacactggagaag
caccggggggataagcgcgagttcctgtacacacgggagcagttggaggcgggtcgcacc
catgacgagctgtggaacgcatgtcagtgggagatggtgcacgtgggcaagatgcatggc
tacatgcggatgtactgggccaagaagatcttggagtggacccctgggccggaggaggcc
attgagattgccatctacctgaacgaccggtacgagcttgacggccgcgacccctccggc
tacgtcggagtcatgtggagcatggcaggcatacacgacatgggctggacggagcgaccc
atctttggcaagatccgctacatgaactacaacggctgcaaacgcaagttcgacatcaag
gcttactgcgcctatgtggaccgactggtgggggaggtcagggccaagcagagggctaaa
gccaaggccaccgcggcagctgggtcgggggccgaagccgcggctgacaacgaggcgcca
gtggcggcggcggcggcggccggggtggaagggaagtccggagctggcgggagcggggag
ctggcccagagcagcaagaaggcgggcaagaagtcgtccgaagtgggttcctcgaaaggg
acgggtcaaaggaaagccggtgcaacttag
DBGET
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