Volvox carteri f. nagariensis: VOLCADRAFT_64280
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Entry
VOLCADRAFT_64280 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_64280
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
90S particles
Other 90S particles
VOLCADRAFT_64280
Pre-60S particles
Other pre-60S particles
VOLCADRAFT_64280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_HPS5
PALB2_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
9617173
NCBI-ProteinID:
XP_002953923
JGI:
64280
UniProt:
D8U5N8
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MISAVSWIPRGVAKAVPTVAQPTEEEMEAMRAQIEAEGEGEDDDEDDAEASETDSDNMDS
DDPAKDEPVDEAVARARAVASAMASSRAAGGGKSSAGTGGLEDAMRELDMDHYDDAGDDD
ADVINRVLGTSGRARLEYAAGEDDPYLKLGDDDSEIEDFTLRPTDLIILSAKNEDDVSNL
EVWVYEEADASGEANLYVHHEVLLPAFPLCVSWLDCDPGGDPARRNLVAVGTLEPAIEIW
DLDVVDTVEPVLCLGGEKKKKKKKKKKASKPKLQPGSHEDSVLGLSWNREYRNVLASGSA
DCTVKVWDLVKGVCEHTLRCHTDKVQAVAWNPAESPVLLTGSFDRSVCLADARTPQGDPA
RWRVSADVEALCWNPHDPTCFLVSSEDGIVAHYDARKGAGGCLSDASLFRLSAHDKPACT
LSFCPAVRGLLATGSTDKKVKLWDLAGNAPHLVCTQDLNTGAVFSAAFCGDAPYLLAAGG
AGGEVVVWDVRAHSAVAAKYPAFAATLPAGASQQEDD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggcagtgtcatggataccgaggggcgttgcaaaagctgtaccgacagtagca
caaccaacagaagaagagatggaagctatgcgggctcagatagaggcggaaggggaaggc
gaagatgatgacgaagatgacgccgaggcttccgaaacggactctgacaatatggatagc
gatgatcctgctaaggacgagcctgtggatgaggcagttgcccgcgcccgggccgtggca
tcagcgatggcctcttcgcgagccgccggcggcggcaaatcttccgctggcaccggcgga
ctagaagacgccatgcgcgaactcgatatggaccactacgacgacgccggcgatgacgac
gccgacgtcatcaaccgcgtcctcggcacgtcagggcgagcccggctcgagtacgctgcc
ggcgaggacgacccctacctaaaactcggcgacgacgacagcgaaatcgaggacttcacc
cttcgccccacagacctcatcatactctccgccaaaaacgaagacgacgtcagcaatttg
gaggtctgggtatacgaggaggccgacgcaagcggcgaagccaacctgtacgtccaccac
gaagtgctgctgcccgccttcccgctctgcgtctcctggctcgactgcgaccccgggggg
gacccggcccgccgcaatctggtggcggtgggcaccctggagcccgccattgaaatatgg
gatttagacgtggtggatacggtggagccggtgctgtgtctaggcggtgagaagaagaag
aagaaaaagaagaagaagaaggcctccaagcccaagctgcagcccggcagccacgaggac
agcgtgttgggcctgtcatggaaccgggagtaccgcaacgtgttggcgtcggggagtgcg
gactgcaccgtcaaggtgtgggacctggtgaagggcgtctgcgagcacaccctgcggtgt
cacacggacaaggtccaggcggtggcgtggaaccccgcggagtcccctgtgctgctcacc
gggtccttcgaccggagcgtgtgtctggcggatgcccgcaccccccagggtgaccccgcg
cgttggcgtgtctccgccgacgtggaggcgctgtgctggaacccgcacgacccgacctgc
ttcctggtgtcctctgaggacggcatcgtggcgcattacgatgcaagaaagggcgcaggt
gggtgcctgtctgacgcctcgttgttccggttgtccgcccacgacaagcccgcctgcacg
ttgagcttctgtccggcggtgcgcgggcttctggccacgggctctacagacaagaaggtc
aagctgtgggacctggccggcaatgcgccccacctcgtgtgcacccaggacctcaacacg
ggggcggtattctcggcggccttctgcggggatgcgccgtacttgttggcggcgggaggg
gcgggcggggaggtggtggtgtgggacgtgcgcgctcactccgcagtcgcggccaagtac
cctgcctttgctgccaccttgcctgcaggcgcctcgcaacaggaggacgactag
DBGET
integrated database retrieval system