KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_64280
Entry
VOLCADRAFT_64280  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_64280
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VOLCADRAFT_64280
  Pre-60S particles
   Other pre-60S particles
    VOLCADRAFT_64280
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD_LRWD1 Beta-prop_EML Beta-prop_WDR75_1st EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_HPS5 PALB2_WD40 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 9617173
NCBI-ProteinID: XP_002953923
JGI: 64280
UniProt: D8U5N8
LinkDB
Position
Unknown
AA seq 517 aa
MISAVSWIPRGVAKAVPTVAQPTEEEMEAMRAQIEAEGEGEDDDEDDAEASETDSDNMDS
DDPAKDEPVDEAVARARAVASAMASSRAAGGGKSSAGTGGLEDAMRELDMDHYDDAGDDD
ADVINRVLGTSGRARLEYAAGEDDPYLKLGDDDSEIEDFTLRPTDLIILSAKNEDDVSNL
EVWVYEEADASGEANLYVHHEVLLPAFPLCVSWLDCDPGGDPARRNLVAVGTLEPAIEIW
DLDVVDTVEPVLCLGGEKKKKKKKKKKASKPKLQPGSHEDSVLGLSWNREYRNVLASGSA
DCTVKVWDLVKGVCEHTLRCHTDKVQAVAWNPAESPVLLTGSFDRSVCLADARTPQGDPA
RWRVSADVEALCWNPHDPTCFLVSSEDGIVAHYDARKGAGGCLSDASLFRLSAHDKPACT
LSFCPAVRGLLATGSTDKKVKLWDLAGNAPHLVCTQDLNTGAVFSAAFCGDAPYLLAAGG
AGGEVVVWDVRAHSAVAAKYPAFAATLPAGASQQEDD
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgatttcggcagtgtcatggataccgaggggcgttgcaaaagctgtaccgacagtagca
caaccaacagaagaagagatggaagctatgcgggctcagatagaggcggaaggggaaggc
gaagatgatgacgaagatgacgccgaggcttccgaaacggactctgacaatatggatagc
gatgatcctgctaaggacgagcctgtggatgaggcagttgcccgcgcccgggccgtggca
tcagcgatggcctcttcgcgagccgccggcggcggcaaatcttccgctggcaccggcgga
ctagaagacgccatgcgcgaactcgatatggaccactacgacgacgccggcgatgacgac
gccgacgtcatcaaccgcgtcctcggcacgtcagggcgagcccggctcgagtacgctgcc
ggcgaggacgacccctacctaaaactcggcgacgacgacagcgaaatcgaggacttcacc
cttcgccccacagacctcatcatactctccgccaaaaacgaagacgacgtcagcaatttg
gaggtctgggtatacgaggaggccgacgcaagcggcgaagccaacctgtacgtccaccac
gaagtgctgctgcccgccttcccgctctgcgtctcctggctcgactgcgaccccgggggg
gacccggcccgccgcaatctggtggcggtgggcaccctggagcccgccattgaaatatgg
gatttagacgtggtggatacggtggagccggtgctgtgtctaggcggtgagaagaagaag
aagaaaaagaagaagaagaaggcctccaagcccaagctgcagcccggcagccacgaggac
agcgtgttgggcctgtcatggaaccgggagtaccgcaacgtgttggcgtcggggagtgcg
gactgcaccgtcaaggtgtgggacctggtgaagggcgtctgcgagcacaccctgcggtgt
cacacggacaaggtccaggcggtggcgtggaaccccgcggagtcccctgtgctgctcacc
gggtccttcgaccggagcgtgtgtctggcggatgcccgcaccccccagggtgaccccgcg
cgttggcgtgtctccgccgacgtggaggcgctgtgctggaacccgcacgacccgacctgc
ttcctggtgtcctctgaggacggcatcgtggcgcattacgatgcaagaaagggcgcaggt
gggtgcctgtctgacgcctcgttgttccggttgtccgcccacgacaagcccgcctgcacg
ttgagcttctgtccggcggtgcgcgggcttctggccacgggctctacagacaagaaggtc
aagctgtgggacctggccggcaatgcgccccacctcgtgtgcacccaggacctcaacacg
ggggcggtattctcggcggccttctgcggggatgcgccgtacttgttggcggcgggaggg
gcgggcggggaggtggtggtgtgggacgtgcgcgctcactccgcagtcgcggccaagtac
cctgcctttgctgccaccttgcctgcaggcgcctcgcaacaggaggacgactag

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