KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_65162
Entry
VOLCADRAFT_65162  CDS       T01330                                 
Symbol
cdkd1
Name
(RefSeq) hypothetical protein
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03022  Basal transcription factors
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VOLCADRAFT_65162 (cdkd1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_65162 (cdkd1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:vcn01001]
    VOLCADRAFT_65162 (cdkd1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_65162 (cdkd1)
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_65162 (cdkd1)
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_65162 (cdkd1)
Enzymes [BR:vcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     VOLCADRAFT_65162 (cdkd1)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     VOLCADRAFT_65162 (cdkd1)
Protein kinases [BR:vcn01001]
 Serine/threonine kinases: CMGC group
  CDK family
   VOLCADRAFT_65162 (cdkd1)
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     VOLCADRAFT_65162 (cdkd1)
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     VOLCADRAFT_65162 (cdkd1)
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     VOLCADRAFT_65162 (cdkd1)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 BEN FTA2
Other DBs
NCBI-GeneID: 9621513
NCBI-ProteinID: XP_002954735
JGI: 65162
UniProt: D8U821
LinkDB
Position
Unknown
AA seq 352 aa
MAENYARGDMLGQGTFAVVYKGQDKRTGKVVALKEIFADEKSTDGKKGLDPTALREIKLL
RELRHPNIIRLEDAYPKKKSVVLVLEFMHSDLEAIIRDQNLVLAAADVKSYMRQLLAALD
TCHRRWVLHRDIKPNNCLIAPDGSLKLADFGLSRLYGSPDGRLTHQVFAQWYRAPELFFG
ARQYTAAVDVWAAGCIFGELLLRRPLFDGMCDIDVLSKVFGLLGTPGVEGNWPAAKDLPY
FLQFTENKPVPLRQVFPAASGDALDLLGRMIQLDPLRRISSTDALRHPYFTNNPPPTPPA
LLPRTAKREDAPLLAPGQAAPGKGGKCNKEAAERGGEEVPRGKMHVRGLPKG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggctgagaattatgctcgtggcgacatgctcggtcagggcacttttgccgttgtttac
aaagggcaagataagcggacgggcaaggtagtggcgctgaaggagatcttcgcggacgag
aaaagcaccgatggcaagaagggtttggaccccaccgcccttcgggagatcaaactgctg
cgggagctgcgccaccccaacattatccgactggaggacgcctaccccaagaagaaatct
gtggtgctggtgttggagttcatgcacagtgatctggaggcgatcattcgggatcagaac
ctggtgttggcggcggcggatgtgaagagctacatgcgacagctgctggcggcgttggac
acgtgccacaggcgttgggtgctccatagggacatcaagcccaacaactgcctcatcgcg
cctgatggatcactcaagctggcagatttcggactgtcacgtttgtacggcagccctgac
ggccgcctcacacatcaggtctttgcgcagtggtatcgcgcgccggagctgtttttcggt
gcccggcagtacaccgcggcagtggacgtctgggcggcgggctgcattttcggggagctg
ctgctccgaaggccgctattcgacggcatgtgcgacatcgacgtgttgtccaaggtgttc
gggttgctgggcaccccgggggtggagggcaactggccggcagccaaggacctgccgtac
ttcctgcagttcacggagaacaagccggtgccgctgcgccaggtcttcccggcggccagc
ggcgacgcgctggacttgttgggtcgcatgatacagctggatccgttgcgccgcatctcc
tccaccgatgcgctgcgccacccttacttcaccaacaatccgccgcccacgccgccggcg
ctgctgccgcgcacggcgaagcgcgaggatgcgccgttgctggctccggggcaggcggcc
ccagggaagggtggtaagtgcaataaagaggccgcagaaagggggggggaggaggttcct
agggggaaaatgcacgtgcgcggactcccaaaggggtga

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