KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_65509
Entry
VOLCADRAFT_65509  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K13103  tuftelin-interacting protein 11
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_65509
Spliceosome [BR:vcn03041]
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    VOLCADRAFT_65509
  Other components
   Complex C specific factors
    VOLCADRAFT_65509
SSDB
Motif
Pfam: GCFC TIP_N G-patch G-patch_2
Other DBs
NCBI-GeneID: 9621943
NCBI-ProteinID: XP_002955122
JGI: 65509
UniProt: D8U8W2
LinkDB
Position
Unknown
AA seq 786 aa
MENDYEGGQWINGEFYYSKKRQKRMQTKDERIYGVFADDSDDSDGDRRGRRRDRDRERDY
TKPVGFVSSGKIVQDTMKDDEEDAGGDNNEEAVMPSAFGKRYVRRCFCRPRGIVVTADPT
FANFEKHTKGIGLKLLEKMGYKPGEGLGRNKQGIAKPVEARMRPKGMALGFGDRDEPRME
LPQPHGGPGGLGLGAQPGGRAPGADGAARDQDGKARVRREYRTADQVLAEAAEQPLQAQP
ILDMRGPQARVITNLQHLNQETVTATGDKTPMPELQHNLRLLVDLAEAAIQKLDAKLRHE
QDTATLLAREKERLEAEDARQEEACSRLEAVSAEVEAVRGMPAATPLGELAEAYGRIRER
YREEYIMYGLAQAALAQVLPRMQALLRGWEPLSEPLRGVPEIKTWKELLQSDAAGGGGPY
DTVGASAGSGSGSDDPYTLLVWEVVLPPVRSSALNGWQPRDPEPLLKWLETWEPLLPPSA
LGHVLEMLVMPKLRRALGEWEPRQETVPIHAWLFPWLPYLGQALDELYPHIRHKLDVALQ
AWHPSDGSALVLLSPWQRVWGQAEWDAFMAKAIVPKLALALGQMDINPAAQQMEPWMWAM
AWKDIISAQLMAGMLERVFFPRWHAVLQHWLTHGANFDEVTRWYLGWKSAVPQGILDHER
VRAQFNAALNTMNSVLEDGTLPPQPAFSTPYDAGVYAAAAAAGAAAAAAASRELTLRDLV
MRFAEENGVEFQPKAGRTYEGLQVYSFGSVSVVLDNTSGVIRAQLGPRWAPVSLEQLQQL
VVARRR
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggagaatgattacgagggcgggcaatggatcaatggcgagttttactactccaagaaa
cgacagaaacgcatgcagaccaaggacgaacgaatctacggtgtctttgccgatgactct
gatgactccgatggcgaccgtcgtggccgtcgccgcgatcgtgaccgtgaacgggattac
acgaagcccgttggcttcgtgtccagcggtaaaattgttcaagatacgatgaaggacgac
gaggaggacgccggtggggataacaacgaagaggcagtgatgccatcagcctttgggaaa
cggtatgtaaggcgttgcttctgccggcctcgtgggatagtggtaaccgccgacccgacc
tttgctaactttgaaaagcacaccaagggaattggtctcaagctgctggagaagatggga
tacaaaccaggcgagggcctgggccgcaacaagcaggggatagcgaagccggtggaggca
cggatgcgacccaagggcatggcgttgggctttggggaccgggatgagcctcgaatggag
ctgcctcagcctcacgggggccccgggggcctggggctaggggcccagccgggcgggagg
gcgccgggagcggacggcgcagcccgggaccaggacgggaaggctcgtgtgcggagggag
taccgcaccgccgaccaggtgctggcggaggcggcggagcagcctctgcaggcgcagccc
atcctggacatgcggggccctcaagcccgcgtcatcaccaacctgcagcaccttaaccag
gagaccgtcactgcgacaggtgacaagacgcccatgccggagctgcagcacaacctaagg
ttgttggtggatctagcagaggcggccattcagaagttggatgccaaactgcggcacgag
caggataccgcgacactgctagcccgggagaaggagcggctggaggcggaggacgcgcgg
caggaggaggcatgctcacggctggaggcggtgtccgcggaggtggaggcggttcggggc
atgccagcggcaacaccgctgggggagctggcggaggcgtacggaaggatacgagagcga
taccgcgaggagtacatcatgtacgggctggcgcaagccgcgctggcgcaggtgttgccg
cgcatgcaggccctgctcagaggctgggagccgctgtccgagccgttgcggggggtgccg
gaaataaagacgtggaaggagctgctgcagagcgacgcggcgggaggcggaggaccttac
gacactgtcggtgcatcggcaggcagcggtagcggctccgacgatccgtacacgctgttg
gtttgggaggtggtcttgccgcctgtgcgcagttcggcgcttaacgggtggcagccaagg
gaccccgagccgctgctcaagtggcttgagacctgggagccgctgctccctccctctgcg
ctgggccacgtgttggaaatgctggtgatgcccaagctgcggagggcactgggcgagtgg
gagccaaggcaagagacggtgcccatacatgcctggctcttcccttggctgccatacctg
gggcaggccctggacgagctgtatccgcacatacgtcacaagcttgatgtggcgctgcag
gcctggcaccccagcgacggctcggcgctggtgctgctgtcgccatggcagcgcgtgtgg
ggtcaggcggagtgggacgcgtttatggccaaggccatcgttcccaagctggcgctcgcc
cttggccagatggatatcaacccggcagctcagcagatggagccatggatgtgggctatg
gcgtggaaggacatcatcagcgcacagcttatggccggtatgctggagagggtcttcttc
cccagatggcatgccgtgttgcagcattggctgacccacggggcgaacttcgacgaggtg
acccgctggtacctgggctggaagtcggcagtgccgcagggcatcctggaccatgagcgc
gttcgggcgcagttcaacgctgccctcaacactatgaactccgtcctggaggatggtaca
ctaccgccccagccagcattctcaacgccgtacgacgccggcgtgtacgccgccgctgcg
gccgccggcgccgctgccgcggctgctgctagccgcgagctgacgctgcgcgatctggtg
atgcgtttcgcggaggagaacggtgtggaattccagcccaaggcgggccgcacgtacgag
gggctgcaagtgtacagtttcggcagcgtgagcgttgtgctggacaataccagcggtgtc
attcgtgcgcaactggggccgcgctgggcgcccgtgtcgttggagcagttgcagcagctt
gtggtggctcggcgccggtag

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