Volvox carteri f. nagariensis: VOLCADRAFT_66444
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Entry
VOLCADRAFT_66444 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VOLCADRAFT_66444
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcn01007
]
VOLCADRAFT_66444
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_66444
Enzymes [BR:
vcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
VOLCADRAFT_66444
Amino acid related enzymes [BR:
vcn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
VOLCADRAFT_66444
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VOLCADRAFT_66444
Prokaryotic type
VOLCADRAFT_66444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1c
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
9615172
NCBI-ProteinID:
XP_002955960
JGI:
66444
UniProt:
D8UBB8
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSSNTKITREWYPPAADGTQTAPLMLYNSFVDEKVPFVPVAGPNSRQITWYACGPTVYDV
AHMGHARNYLSFDIVRRVLEDYFGYNCLMVMNVTDVDDKIILRARRNYLLAQYKRSGKTP
DEHTEERHVDGKRAGADARMESSGRRKGGLGEKMTSRSSPASSLELEKAVAPAPRALQLL
ETGASAPVDALIDLGGDYVAEALDRELGAAVTDPSVFRAHAAKYEREFLEDMDALGCRRP
DVLTRVSEYMPEIVNYVQRILDNGMAYVSNGSVYFDTQNFRACGHTYGKLNPWAVGSAAL
AAEGESNFETSEKRSLQDFALWKASKPGEPVWDSPWSQGRPGWHIECSAMASTIIGSRLD
LHSGGEDLRFPHHDNELAQAEAYYHTEWWVNYFLHCGHLHIEGLKMSKSLKNFITIREAL
QTFNARQLRLMFVLQPWNKTMMYGEQARAEMKAREAQLKNFFQNVEAAVRGQDICTTEQR
WQPEDFELNSRILGAQTAVDLALRDNINTPAAMDALSELIKAVNKYLEKKVGAARPLLLR
KAASYVTRILSVFGLVDGPGDRYSTWQLASPSAKVSAGTSRYLDALVAFRQEVCAMAAAA
AEPREVLAACDRLRDQTLVDLGVRLEDRPEGTAVGWEGGGSEGIGKGLYM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaacacaaaaatcacacgcgaatggtacccgccagccgccgatgggacgcaa
acagcaccgctaatgctttacaacagcttcgtggacgaaaaagtcccgtttgtgccggta
gctgggccgaacagcagacagataacttggtatgcgtgcggaccgactgtctacgacgta
gcgcatatgggacacgcgcgcaactacttaagcttcgacatcgtccgtcgcgtcttggag
gattactttggctacaactgtttgatggtcatgaacgtcaccgacgtggatgacaaaatt
attttgcgcgctcgccggaactacctgctggcgcagtacaaacgctctggcaagaccccc
gacgagcacacggaagaaaggcatgtagatgggaagagggcgggggcggatgccaggatg
gaatcgtccggccgacggaaggggggtttgggtgaaaaaatgaccagcagatcgtcgcca
gcttcttcattggagctggaaaaggccgtggcgcctgctccccgggccctacagctgcta
gagacgggtgcttccgcaccggtggatgctctgattgacctagggggtgactacgtggct
gaggcactggacagggagctgggggcggcggttacggatccgtcggtgtttcgcgcacac
gccgcgaagtacgagcgtgagttcctggaggacatggacgcgctgggctgccgccgaccc
gacgtcctgacccgtgtgtccgagtacatgccggagatcgtcaactacgtgcaacgaatt
ctggacaacggaatggcgtacgtatccaacggctccgtctactttgacacgcaaaacttc
agggcctgcgggcacacgtacggcaagttgaacccgtgggctgtcggcagcgctgcgctg
gcggcggagggcgagagcaactttgagacgtcggagaagcggagtctgcaggactttgct
ctgtggaaggcctccaagcccggggagcccgtgtgggactccccctggagtcagggccgc
cccggctggcacatcgaatgcagcgccatggcctccaccatcattggctcccgactggat
ctgcactcggggggggaggacctcaggttccctcaccacgacaacgagctggcgcaggcg
gaggcgtactaccacacggagtggtgggtgaattactttttgcactgcggtcatttgcac
attgagggcctgaagatgtccaagtccctcaagaatttcatcaccatcagggaggccctg
cagacgttcaacgcccggcagctgcggctcatgtttgtcctgcagccctggaacaagacg
atgatgtacggcgagcaggcccgggcggaaatgaaggcccgtgaggcgcagctgaagaac
tttttccagaacgtggaggcggcggtgcgggggcaagacatatgcactaccgagcagcgc
tggcagcccgaggactttgagctcaacagccgcattctgggagcccagacggcagtggac
ctggcgctgcgggacaatatcaacacacccgccgctatggacgccctctcggagctcatt
aaggcggtcaacaagtacctggaaaagaaggtgggggctgctcggccgctgctgctgcgc
aaggcggcgtcgtacgtgacacgcatcctgtccgtgttcggcctcgtggacggtcctggc
gacaggtattcaacctggcagcttgcgagcccttcggccaaggtcagcgcgggcactagc
cgctacttggacgccttggtggcgtttcgccaggaggtgtgcgccatggcagctgcggcc
gcggagccgcgggaggtgctggcggcttgtgaccggctccgagaccaaacgctagtggac
ctgggcgtacggctggaggaccggccggagggtacggcggtcggctgggaagggggcggg
agcgaggggattggaaaggggttatatatgtag
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