Volvox carteri f. nagariensis: VOLCADRAFT_66874
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Entry
VOLCADRAFT_66874 CDS
T01330
Symbol
Bbs4
Name
(RefSeq) Bardet-Biedl syndrome protein 4
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_66874 (Bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_66874 (Bbs4)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
VOLCADRAFT_66874 (Bbs4)
Cilium and associated proteins [BR:
vcn03037
]
Primary cilia and associated proteins
BBSome
VOLCADRAFT_66874 (Bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_11
TPR_16
TPR_14
TPR_17
TPR_19
TPR_6
TPR_9
ANAPC3
TPR_CcmH_CycH
TPR_7
TPR_10
TPR_Slam
ARM_TT21_4th
TPR_MalT
NatA_aux_su
ARM_TT21_5th
Wzy_C_2
ARM_TT21_C
Coatomer_E
TPR_15
ARM_TT21_2nd
T7SS_EccA1_N
PknG_TPR
BTAD
ANAPC8
HAT_PRP39_C
TPR_EMC2
ANAPC5
Motif
Other DBs
NCBI-GeneID:
9619438
NCBI-ProteinID:
XP_002956411
JGI:
66874
UniProt:
D8UCI1
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MSSLAQQRDKRNYALHLLYTRQEFEECLKQIDKILEDTDGLCEYAIYIKALIMRHRGKIQ
ESLQLFQQATAINPHNTANLKQVGRSLYLLGKHKAAVDVYEEAQKFGAPDWEIMHNKGLC
YMYLKQYDRAIESFRIAIDIQPHDSTFLQLGKVYSMMDDFTQAINVYMEALEHSPENPEV
LTTLGLLFLRTCDNNRAFDYLSTSLTHDPRNPRTILAAGSIIQDHSDMDVALVKYRVAAV
QTPNSPQLWNNIGMCFFGKQRYIAAIACLKKALYLGPFEWIISYNLGLVHLHTGQYASAF
HYFSASVNLKPDFAHSYMYLAVTLARLDDFENACAAYEKAIQMAGQPGEPVFHLNYAILL
YNQKQYDNAKLHLHQFRTLFQDMDEEARRADPEVTEQAGLLGQLLNI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcttgcacagcagcgcgacaagcgcaactatgcattacacctattatatact
cgacaggagttcgaggagtgcctaaagcaaatagacaaaatactagaggatacagatggc
ctctgtgaatacgcaatctacatcaaagctctcatcatgcgacatagaggcaaaattcag
gagtccttgcagctgttccagcaggccaccgccatcaacccgcacaacacggccaacctc
aagcaggtgggtcgctctctgtacctgctaggcaagcataaggccgctgtggacgtgtac
gaggaggcccagaagtttggggcacccgactgggagatcatgcacaacaaagggctatgc
tacatgtacttaaaacaatatgacagggccatcgaatcattccgcatcgccattgacatc
cagccccatgactccacctttctgcagctgggcaaggtgtacagcatgatggacgacttc
acgcaggccatcaatgtatacatggaggctctggagcactcccctgagaacccggaggtg
ctcaccacgctggggctgctgttcctcaggacctgcgacaacaaccgggcgttcgactac
ctgagcacatccctcactcatgacccccgcaaccctaggaccatcctggcggctgggtcc
atcatacaggaccactccgacatggatgtggcgctggtgaagtaccgcgtggcggcggtg
cagacccccaacagcccccagctgtggaacaacataggaatgtgcttctttggaaagcag
cgctatatcgccgccatcgcctgtctgaaaaaggccctgtacctgggtccgttcgagtgg
atcatctcgtacaacctgggcctggtgcacctgcacacgggccagtacgcctccgccttc
cactacttctccgcgtcagtcaacctcaagcccgattttgcgcactcgtacatgtacctg
gcagtcacgttggcgcgactggacgactttgagaacgcgtgtgcggcttacgagaaggcc
attcagatggcgggacaaccgggggagcccgttttccacctcaattacgccatcctgctg
tacaaccaaaagcaatacgacaatgccaagctccacctgcaccagttccgtaccctgttc
caagatatggacgaggaggctcgccgggcggacccggaggttacggagcaagcggggttg
ctgggccagctacttaacatctga
DBGET
integrated database retrieval system