Volvox carteri f. nagariensis: VOLCADRAFT_69109
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Entry
VOLCADRAFT_69109 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K06063
SNW domain-containing protein 1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_69109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_69109
Spliceosome [BR:
vcn03041
]
Complex B
Other components
Prp19-related factors
VOLCADRAFT_69109
Complex C
VOLCADRAFT_69109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
9623243
NCBI-ProteinID:
XP_002958146
JGI:
69109
UniProt:
D8UHM3
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSLLANLPAPTKQHAAPILAVPASSAIVSTAYKEPPPYLRRQGWVPRRAEDFGDGGAFPE
IHVAQYPLDMGKGGGAKGNQQLAVTLNADGQINYDAVVKQGSNRDRIVHSDHSALVPKVD
RLSKEALARPDDEEVEKTIQETAAALERVVQGKLSSTNPSKLPNQPGSSTLIKYTPAQQG
AQYASGAGQRIIKMQDLPVDPLEPPKFRHVKVPRGPGSPPVPVLHSPPRPLSVKDQQDWK
IPPSISNWKNPKGYTIPLDKRLAADGRGLQQTQINDKFAALSEALFTAEAKAREAIAMRA
SIQKELALKEKNKREAELRQLAMQARMERQGAGAGAAGGMAAPPPPPPPSAGGAAARGTA
DRDRDYDRGRGGGDDERYRETVEEREERRRRDEIREERRRERERERRLEAANQGGAKKSK
ITRDRERDISEKVALGMANVGAGGEVQYDQRLFNQDAGMQSGFGPDDAYNMYDKPLFADR
GSHLFKASRATADDEDLGPSDAGPRTDRFRPDKGFEGAEPAPGAAARGGGGRLEFERQAA
AAEEADPFGLDQFLSEVKGGGRERGGRKGNALDAIGQRGGMSAAGGGASFEDAGAGAGMG
RRMQFTSGSGR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttagcaaaccttccggcacctacgaagcaacatgcagctccaatactggct
gtaccagcatcttctgctattgtttcaacagcctataaggagcccccaccctatctgcgt
cgtcaaggatgggtgccccgacgagcagaggactttggagatggcggagcatttccagaa
attcatgttgcacagtaccctttggatatgggcaagggtggcggcgccaaggggaaccaa
cagcttgcggtgaccttaaatgccgatgggcagatcaactatgacgccgtggtgaagcag
ggtagcaacagggatcgcatcgtccactcggaccacagcgcgcttgttccgaaggtggac
cgtctgagcaaggaggccctggcccggcccgatgacgaggaggtcgagaagactattcag
gagaccgctgcggccctggagcgggtggtgcagggcaagctgtcttccaccaacccctct
aagctgcccaaccagccggggagctccaccctcatcaagtacacgcccgcgcagcaggga
gcgcagtacgcctccggagcgggtcagcgcatcatcaagatgcaggacctaccggtggac
cccctggagccgcccaagttcagacacgtcaaagtacccaggggacccgggtcgcccccc
gtacccgtactgcactcgccgccacggccgctcagtgtgaaggaccagcaggactggaag
attccgccctccatctccaactggaagaaccccaagggttacaccatcccgctggacaag
cgtcttgcggcggatggtcggggcctgcagcagacccaaatcaacgacaagttcgcggcg
ctgagtgaggcgctgttcaccgcggaggccaaggcgcgagaggccatcgccatgcgggcc
agcatccagaaggaactggcgctcaaggagaaaaacaagcgagaggcggagctcaggcaa
ctcgccatgcaggcgcgcatggagaggcagggagcgggcgcgggggcagctggaggcatg
gcggcgccgccgccgccgccgccaccttccgccgggggtgcggctgcgcgaggtacggcg
gaccgggaccgtgattatgaccgtggccgcggcggcggcgacgatgagcgctaccgcgag
acggtggaggagcgcgaggagcggcggcggcgcgacgagattcgggaggagcgccggagg
gagcgagagcgagagcgccggctcgaggccgccaaccaagggggcgccaagaagtccaag
atcactcgggatcgcgagcgtgacatcagcgaaaaggttgctctgggtatggccaacgtg
ggtgccggcggcgaggtccagtacgaccagcgcctgtttaaccaggacgctggtatgcag
agcggctttggtcccgacgacgcgtacaacatgtacgacaagccgctgttcgcggatcgt
ggcagccacctgttcaaggccagccgcgccacggcggacgatgaggacctcgggccctcg
gacgccgggccgcgcaccgaccgcttcaggccggataagggcttcgagggggcggaaccg
gctccaggtgcggcggctcgtggcggcggcggccggctggagttcgagcggcaggcagct
gccgcagaagaggcggaccccttcggtctggaccagttcctgtcggaggtcaagggagga
ggacgggagcgagggggccgcaagggcaacgcgctggacgccattggtcagcgtggcggc
atgagtgcggcgggtggaggcgcttctttcgaagacgccggtgcgggtgcgggcatggga
cggcggatgcaatttacctcgggcagcggccgctga
DBGET
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