KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_72779
Entry
VOLCADRAFT_72779  CDS       T01330                                 
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn00260  Glycine, serine and threonine metabolism
vcn00460  Cyanoamino acid metabolism
vcn00630  Glyoxylate and dicarboxylate metabolism
vcn00670  One carbon pool by folate
vcn01100  Metabolic pathways
vcn01110  Biosynthesis of secondary metabolites
vcn01200  Carbon metabolism
vcn01230  Biosynthesis of amino acids
vcn01240  Biosynthesis of cofactors
vcn04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VOLCADRAFT_72779 (shmt2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VOLCADRAFT_72779 (shmt2)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    VOLCADRAFT_72779 (shmt2)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VOLCADRAFT_72779 (shmt2)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VOLCADRAFT_72779 (shmt2)
Enzymes [BR:vcn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     VOLCADRAFT_72779 (shmt2)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 9617767
NCBI-ProteinID: XP_002946621
JGI: 72779
UniProt: D8TJI5
LinkDB
Position
Unknown
AA seq 490 aa
MTGAEHDLGNGQHVTPAMAAVFPEAHTPLSVADPELFALIEDEKVRQWKGIELIASENFT
SLPVLEALGSCLTNKYSEGQPGARYYGGNENIDKIELLCKRRALEAFGLSPDEWGVNVQP
YSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYTQGKKISATSIFFESLPYKLNPQ
TGLVDMDKLEEKATEYRPKMIICGASAYPRDWDYQRFREVADKVGALLMVDMAHISGLVA
AGTLSSPFEYADIVTTTTHKSLRGPRAGMIFFRRGPKPVARLLKGDSEGAVYDFEDRINF
AVFPSLQGGPHNHQIGALAVALKYAATPEFKQYSNQVVANCRALANALLKRGYKLVTDGT
DNHLILWDLRPEGLTGSKMEKACDLCHITLNKNAVVGDLSAMNPGGVRIGTPAMTSRGLM
EPDFEEVAGFLHEVLEVCKEVQSTTGKAIKDFVKGLEGNTRIPDIRARVEAWASRFQMPG
FTVPQTAASS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgacaggcgctgaacacgacctcggcaacggccagcatgtcacaccggctatggccgca
gttttccctgaggcccatacaccgctctctgttgccgatccggagctttttgcgttgatc
gaggacgagaaagtgcggcagtggaaaggtattgagctgattgcctccgagaacttcact
tctctgcctgttttggaggcgctcggctcttgcctgaccaacaagtattctgaggggcag
ccaggcgcacgttattacggtggaaatgagaatatcgataagattgaattgctttgcaag
cggcgcgctctggaagcctttggactgtccccagacgagtggggtgtcaatgtgcagcct
tactcgggcagcccagccaactttgcagtatacacagcactcctccaacctcatgaccgc
attatgggcttggacttgccaagtggcgggcacttgacgcatggttactatactcaagga
aagaagatcagtgcgacatctatcttctttgaatcgctcccgtacaagctcaaccctcag
acgggcctagtcgatatggacaaactggaggagaaagcgacggaatatcgccccaaaatg
atcatttgtggggcatcggcttatcctcgtgactgggattaccagcgtttccgcgaggtt
gcggacaaggtcggcgcactgctgatggtggacatggcccacataagcggcctggttgcg
gcgggcactctatcttcaccgtttgagtatgcagacatcgtcaccaccacgacgcacaag
tcgttgcgcggccctcgtgccggcatgatctttttccgccggggcccgaagccagtggcc
aggctgctgaagggcgactcggagggcgccgtgtacgatttcgaggatcgcatcaacttt
gcagtctttccttccctccagggaggtccgcacaaccaccagatcggtgcgctagccgtt
gcactaaagtacgcggcaacaccggaatttaagcaatactccaatcaggtggttgccaac
tgccgtgcgctggcgaacgcgctgctaaagcggggctataagttggtgacggacggcacc
gacaaccatctcatcctatgggacttgcggcctgaaggcttgacgggctccaaaatggag
aaagcctgtgacctgtgtcacatcacgctgaacaagaatgccgttgtcggtgacttgtcc
gctatgaacccgggtggcgtccgtattggcacacccgccatgacgtcgcgaggactgatg
gagcccgatttcgaggaggtggcgggctttctgcatgaagtcctggaggtttgcaaggag
gtccagagcactacgggcaaggcaattaaggactttgtcaagggactagagggcaacacc
cgcattcctgacatccgcgcgcgagttgaggcgtgggctagccgatttcagatgcccggg
tttactgtgccgcagacggcagcttcaagctga

DBGET integrated database retrieval system