KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_72850
Entry
VOLCADRAFT_72850  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_72850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_72850
Spliceosome [BR:vcn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    VOLCADRAFT_72850
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    VOLCADRAFT_72850
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 9618233
NCBI-ProteinID: XP_002946694
JGI: 72850
UniProt: D8TKN7
LinkDB
Position
Unknown
AA seq 226 aa
MELYGSSTTYNLENVLRQNILGSDYYRQTCTSLNNWSDIVDEIYENVDHVEPWMSGNARG
ASSAFCLLHRLFTLKLNPKQIKDMLDHRDSPYIRAVGFLYLRYVADPKTLWSWCGPYVKD
QEMLAPSGPEQKEVTMGDYVRDLLLSQYYFETIFPRIPKPVQDVINEELKSRNLPTTAKG
NGGAGGADRRGVDDAGNRRPASVKASLSVAFGQRAPNRSGAREEGR
NT seq 678 nt   +upstreamnt  +downstreamnt
atggaactatacgggtctagcactacatacaatctggagaatgttctacgccagaacatt
ttaggatctgactactaccgacagacatgcacttctttgaacaactggtcggacattgtc
gacgaaatttatgagaatgttgatcatgtggagccctggatgagcgggaatgcacggggt
gcctcgtcggccttctgcctcctccaccggcttttcacgttaaagctgaacccgaagcag
attaaggatatgctggatcaccgcgattcgccgtacatccgcgcggttggcttcctgtac
ctgcgctacgttgcggacccaaagacgctttggagctggtgtggaccgtacgtgaaggac
caagagatgctcgcccctagcggaccggaacagaaggaggtgactatgggcgactacgta
cgagacctcttgttgtcccagtactacttcgagaccatttttccacgcatcccaaagcca
gtccaggacgttattaacgaggagctcaagtcgcgtaatctgcccactacagcgaaaggg
aacggtggcgctggcggtgcagaccgccgtggtgtcgacgacgcgggcaaccgccggcca
gcctcagtcaaagcgtccctgtccgtggcatttgggcaaagagccccgaaccgctccggt
gcacgcgaggagggtcgc

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