KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_73591
Entry
VOLCADRAFT_73591  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03082  ATP-dependent chromatin remodeling
vcn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_73591
   03083 Polycomb repressive complex
    VOLCADRAFT_73591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_73591
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     VOLCADRAFT_73591
  Histone modification proteins
   HAT complexes
    HATB complex
     VOLCADRAFT_73591
   HDAC complexes
    Sin3A-HDAC complex
     VOLCADRAFT_73591
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     VOLCADRAFT_73591
    PRC2.2
     VOLCADRAFT_73591
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     VOLCADRAFT_73591
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    VOLCADRAFT_73591
  Chromatin remodeling factors
   NuRD complex
    VOLCADRAFT_73591
   NuRF complex
    VOLCADRAFT_73591
   NuRF complex (fruit fly)
    VOLCADRAFT_73591
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st eIF2A Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C BT_3535-like
Other DBs
NCBI-GeneID: 9625100
NCBI-ProteinID: XP_002948115
JGI: 73591
UniProt: D8TN97
LinkDB
Position
Unknown
AA seq 418 aa
MGRDEEDYPDEVEERLTNEEYKIWKKNTPFLYDLVVTHALEWPSLTVQWLPDKEIVPGKD
YSKQKLILGTHTSDNEQNYLMIAEVQLPLEESELDGRGYDDERNEVGGFGGAHGKVHVIQ
QINHDGEVNRARHMPQDKFIIATKTISADVYVFDYSKHPSKPQSDGLCRPNLVLTGHKTE
GYGLAWSPYMPGNLLSGSDDAQICLWDIQATPKNVNKLAARTIYQEHQGVVEDVAWHCHH
ADIFGSVGDDKQLILWDVRRPPNQGVMIAAEAHTAEVNCIAFNPLNPNILATGSADKTVA
LHDWRNLSQRLHVFECHADEVFQIGWSPKNETILASCGADRRVMVWDLSRIGDEQTPEDA
EDGPPELLFIHGGHTSKISDLAWNPNDDWVVASVAEDNILQIWQMAFNIYEEPDNMAI
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgggccgcgatgaggaagattatcctgacgaggtggaggagcgactgaccaacgaagag
tataagatttggaaaaagaacactccattcctttatgatcttgtggtgactcacgcgttg
gagtggcccagccttactgtgcaatggcttccagacaaggagattgttccggggaaggac
tactccaagcaaaagcttatactcgggacgcatacgtcagacaatgagcagaattacctt
atgattgcggaggtgcagctgccattggaggaatccgagctggacggccggggatatgat
gatgagcgtaacgaagttggaggatttggcggcgcccacggcaaggtgcacgtgatccag
cagatcaaccatgacggcgaggtcaaccgcgcgcggcacatgccgcaggataagtttatt
attgcaacgaagacaatcagcgcggacgtctacgtgtttgattactccaaacacccctca
aagccgcagtcggatgggctctgtcggccaaacctcgtgcttactgggcataagacagag
ggatatgggctggcgtggtcgccatacatgcccggaaacctcctttctggctctgacgac
gctcaaatctgcctttgggatatccaagcaacaccgaagaacgtgaataaacttgcggcc
aggacgatataccaagagcatcagggcgttgtggaggacgtggcatggcactgccaccac
gctgacatcttcggctctgttggcgatgacaagcagctcattctctgggacgtacggcgc
ccacctaaccaaggcgtcatgatagcagctgaggcgcacacagctgaagtcaactgcatc
gcgttcaatccgctgaatccaaacattcttgcaacaggctccgcagacaagacggttgcc
ttgcacgactggcgtaacctcagccagcggttgcacgtattcgagtgccacgctgacgag
gtcttccagatcgggtggagtcccaagaacgagactatcctggcatcgtgcggcgcggac
cggcgtgtaatggtgtgggacctgtcacgcattggcgatgagcagactcccgaggatgcc
gaggacggcccgccggagcttctcttcatccatggcggacacacctcgaaaatctctgac
ttagcatggaacccgaatgacgactgggtggtggcgtcggttgcagaagataacattctg
cagatctggcaaatggcattcaacatttacgaggagccggacaacatggcaatttaa

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