KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_74070
Entry
VOLCADRAFT_74070  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03020  RNA polymerase
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VOLCADRAFT_74070
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_74070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_74070
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_74070
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VOLCADRAFT_74070
  RNA polymerase III system
   RNA polymerase III
     VOLCADRAFT_74070
  RNA polymerase I system
   RNA polymerase I
     VOLCADRAFT_74070
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VOLCADRAFT_74070
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 9616066
NCBI-ProteinID: XP_002949114
JGI: 74070
UniProt: D8TS01
LinkDB
Position
Unknown
AA seq 77 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL
NYNTLERSAQAQQRPGQ
NT seq 234 nt   +upstreamnt  +downstreamnt
atgattatccccgttcgctgcttcacctgtggaaaggtcatcggcaacaagtgggacacg
tacttggatttgctacaagctggatacagtgaacaggaggctctagacggcttggggctt
agccggtattgctgccgccgtatgcttatgacccacgtggacttgattgaaaagcttctg
aattataataccttggagcgatcagcacaagcacagcagaggcctgggcagtaa

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