Volvox carteri f. nagariensis: VOLCADRAFT_75750
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Entry
VOLCADRAFT_75750 CDS
T01330
Symbol
rfc5
Name
(RefSeq) DNA replication factor C complex subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03030
DNA replication
vcn03410
Base excision repair
vcn03420
Nucleotide excision repair
vcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VOLCADRAFT_75750 (rfc5)
03410 Base excision repair
VOLCADRAFT_75750 (rfc5)
03420 Nucleotide excision repair
VOLCADRAFT_75750 (rfc5)
03430 Mismatch repair
VOLCADRAFT_75750 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_75750 (rfc5)
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_75750 (rfc5)
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_75750 (rfc5)
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VOLCADRAFT_75750 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
VOLCADRAFT_75750 (rfc5)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VOLCADRAFT_75750 (rfc5)
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VOLCADRAFT_75750 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
VOLCADRAFT_75750 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_11
AAA_14
AAA_5
ResIII
RuvB_N
AAA_3
AAA_22
DUF815
AAA_30
DEAD
AAA_24
AAA_assoc_2
AAA_19
AAA_7
ATPase_2
ABC_tran
bpMoxR
Viral_helicase1
MCM
TniB
nSTAND3
AAA_25
DNAX_ATPase_lid
DUF4359
TIP49
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-GeneID:
9625825
NCBI-ProteinID:
XP_002953507
JGI:
75750
UniProt:
D8U4D0
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MEVGRQDITAMANLDEALAAPSSRLRTDGTVDGRNAPWVEKYRPKSLDEVAAHKQIIDTI
KRLTNENRLPHLLLYGPPGTGKTSTILAVARQIYGSSMANMTLELNASDERGISVVRQEI
QDFASTRTIFSNKFKLIILDECDAMTNDAQFALRRVIEKYTRNARFCLICNYVSKVIPAL
QSRCTKFRFAPLDPQFVHERLQYVASTERVNLGSGALDAVVELGNGDMRRSLNILQSCHL
AFDVVDQQAVYLCTGNPLPADISQVLTWLLNEPVADVFEKVTQLQVDRGVALVDVVRELH
PWIMKTSMPVHAKIALVERMADVEHRLAYSTSEKLQLGGLIAAFVKAREVIAKAAK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcggtcgacaagacatcacggccatggccaacctagacgaggccttggcagct
ccaagctcacggttgcgaacggacggaacggttgatggccgtaacgcgccatgggtggag
aagtatcgacctaaaagtctggatgaggtggcagcgcacaagcagattattgatacgata
aaacggctcaccaacgagaaccggttgccgcatctgctgctgtacggtccccccggcacc
ggcaagacgtccaccatcttagcggtggctcgtcaaatatacggcagctcaatggccaat
atgacactggagctgaacgcgtcggacgagcgaggcatcagcgttgtgcggcaggagatc
caggactttgcgtccacacggaccatcttcagcaacaagttcaagctcatcatactggat
gagtgcgacgccatgaccaacgatgcccagtttgcattgcgacgagtgattgagaagtac
acccgcaacgcccgcttctgcctcatctgcaactacgtgtccaaggtcatccctgcactg
cagtctcgatgcaccaagttcaggtttgcccccctggacccccagttcgtacatgagcgg
ctgcagtacgtggcgagcacggagcgagtgaatcttggttccggggctcttgacgcggtg
gtggagctgggcaacggggacatgcgccgctcgctaaatatcttgcagtcttgccatctg
gcattcgacgttgtggaccagcaggcggtgtacctgtgcacgggcaacccgctgcctgct
gacatcagccaggtgctcacgtggctgctcaatgagcccgtggcggacgtgtttgagaag
gtgactcagttgcaggtggaccgcggggtggcgctcgtggacgtcgtgcgggagcttcac
ccgtggattatgaagaccagcatgccagttcatgccaagattgcgctcgtggagcggatg
gcggacgtcgagcaccgtctcgcatacagcacgagcgagaagctgcagttggggggtttg
atagcggcgtttgtgaaggcgcgcgaagttatcgccaaggcggctaagtaa
DBGET
integrated database retrieval system
