KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_75802
Entry
VOLCADRAFT_75802  CDS       T01330                                 
Symbol
fenA
Name
(RefSeq) nuclease, Rad2 family
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03030  DNA replication
vcn03410  Base excision repair
vcn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VOLCADRAFT_75802 (fenA)
   03410 Base excision repair
    VOLCADRAFT_75802 (fenA)
   03450 Non-homologous end-joining
    VOLCADRAFT_75802 (fenA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_75802 (fenA)
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_75802 (fenA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcn04147]
    VOLCADRAFT_75802 (fenA)
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    VOLCADRAFT_75802 (fenA)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     VOLCADRAFT_75802 (fenA)
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     VOLCADRAFT_75802 (fenA)
Exosome [BR:vcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VOLCADRAFT_75802 (fenA)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 9625865
NCBI-ProteinID: XP_002953450
JGI: 75802
UniProt: D8U423
LinkDB
Position
Unknown
AA seq 397 aa
MGIHGLTKLLGDNAPGCIKETKFENLFGRKVAVDASMHIYQFMVVVGRQGDQLLTNEAGD
ITSHLQGMFFRTARMLEAGIKPVYVFDGKPPQLKQDQLAMRSERRADANEALEKAKEAGD
AEAVEKYSKRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLATED
MDALTFGAPRVIRHLMAPSSSNVPVQEIDRAVALQELGLDDDQFIDMCILMGCDYCGTIR
GIGAVRALQLIKKHGSIEAILEELDKAKFPVPEPFPYKESHEFFKNPEVTPAAELPQLKW
SSPDEEGLVQFLVNEKNFSEQRVRAAVSRIKQHKGKANQGRMDTFFTALPKSNTDSAAKT
KEPPAKEDKKRKGGPGAAPAAKGPVKKGKFGVGGGKK
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgggaattcacggactgaccaaactgctcggcgataatgctccgggatgcatcaaggaa
acaaaatttgaaaatctttttggacgcaaggttgctgtcgatgctagtatgcatatctat
cagttcatggtagtcgtcggccggcagggtgaccagctgctgacgaacgaggctggcgac
atcacaagccatctacaaggaatgtttttccgaacagcaagaatgctcgaagctggcatc
aagcctgtgtacgtcttcgacggcaagcccccacaactcaagcaggaccagctcgctatg
cgttcggaacgcagggccgacgccaacgaggccttagagaaggctaaggaggcgggggac
gcggaggctgttgagaagtacagcaagcgttcggtccgtgtcaccaaggagcacaatgag
gattgcaagcgattgctgcgtctcatgggcgtgcccgttgtggaagcaccttctgaggca
gaggcgcagtgtgcggagatggccaaagctggcctagtgtacgggctagcaacggaggat
atggacgcgctcacgttcggcgcgccacgtgtcatccgccaccttatggcccccagtagc
tccaatgtcccagtgcaggaaatcgaccgcgccgtggcgctccaggagctcggcctggac
gatgaccagttcatcgacatgtgcattcttatggggtgcgattactgtggcaccatccgt
ggcatcggggccgtgcgcgcgctgcagctcatcaagaagcacggcagcatcgaggccatt
ctggaggagctggacaaggccaagttcccagtgccggagcctttcccatacaaggagagc
cacgaattcttcaaaaacccagaggtcacgccggctgccgaactgccgcagcttaaatgg
agcagccccgacgaggaggggctagtgcagttcctggtgaacgaaaagaattttagcgag
cagcgtgttcgggcagccgtctcgcgcatcaagcagcacaagggcaaggctaaccagggc
cgtatggatacgttcttcacggcactgccgaagtccaacacggacagtgccgctaaaacc
aaagagccgcccgctaaggaggacaagaagcggaaaggcgggcctggcgcagcgccggcg
gccaaaggaccggtcaagaagggcaagtttggagtcggcggtggcaagaagtaa

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