Volvox carteri f. nagariensis: VOLCADRAFT_75802
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Entry
VOLCADRAFT_75802 CDS
T01330
Symbol
fenA
Name
(RefSeq) nuclease, Rad2 family
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03030
DNA replication
vcn03410
Base excision repair
vcn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VOLCADRAFT_75802 (fenA)
03410 Base excision repair
VOLCADRAFT_75802 (fenA)
03450 Non-homologous end-joining
VOLCADRAFT_75802 (fenA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_75802 (fenA)
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_75802 (fenA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcn04147
]
VOLCADRAFT_75802 (fenA)
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
VOLCADRAFT_75802 (fenA)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
VOLCADRAFT_75802 (fenA)
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
VOLCADRAFT_75802 (fenA)
Exosome [BR:
vcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VOLCADRAFT_75802 (fenA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
9625865
NCBI-ProteinID:
XP_002953450
JGI:
75802
UniProt:
D8U423
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MGIHGLTKLLGDNAPGCIKETKFENLFGRKVAVDASMHIYQFMVVVGRQGDQLLTNEAGD
ITSHLQGMFFRTARMLEAGIKPVYVFDGKPPQLKQDQLAMRSERRADANEALEKAKEAGD
AEAVEKYSKRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLATED
MDALTFGAPRVIRHLMAPSSSNVPVQEIDRAVALQELGLDDDQFIDMCILMGCDYCGTIR
GIGAVRALQLIKKHGSIEAILEELDKAKFPVPEPFPYKESHEFFKNPEVTPAAELPQLKW
SSPDEEGLVQFLVNEKNFSEQRVRAAVSRIKQHKGKANQGRMDTFFTALPKSNTDSAAKT
KEPPAKEDKKRKGGPGAAPAAKGPVKKGKFGVGGGKK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggactgaccaaactgctcggcgataatgctccgggatgcatcaaggaa
acaaaatttgaaaatctttttggacgcaaggttgctgtcgatgctagtatgcatatctat
cagttcatggtagtcgtcggccggcagggtgaccagctgctgacgaacgaggctggcgac
atcacaagccatctacaaggaatgtttttccgaacagcaagaatgctcgaagctggcatc
aagcctgtgtacgtcttcgacggcaagcccccacaactcaagcaggaccagctcgctatg
cgttcggaacgcagggccgacgccaacgaggccttagagaaggctaaggaggcgggggac
gcggaggctgttgagaagtacagcaagcgttcggtccgtgtcaccaaggagcacaatgag
gattgcaagcgattgctgcgtctcatgggcgtgcccgttgtggaagcaccttctgaggca
gaggcgcagtgtgcggagatggccaaagctggcctagtgtacgggctagcaacggaggat
atggacgcgctcacgttcggcgcgccacgtgtcatccgccaccttatggcccccagtagc
tccaatgtcccagtgcaggaaatcgaccgcgccgtggcgctccaggagctcggcctggac
gatgaccagttcatcgacatgtgcattcttatggggtgcgattactgtggcaccatccgt
ggcatcggggccgtgcgcgcgctgcagctcatcaagaagcacggcagcatcgaggccatt
ctggaggagctggacaaggccaagttcccagtgccggagcctttcccatacaaggagagc
cacgaattcttcaaaaacccagaggtcacgccggctgccgaactgccgcagcttaaatgg
agcagccccgacgaggaggggctagtgcagttcctggtgaacgaaaagaattttagcgag
cagcgtgttcgggcagccgtctcgcgcatcaagcagcacaagggcaaggctaaccagggc
cgtatggatacgttcttcacggcactgccgaagtccaacacggacagtgccgctaaaacc
aaagagccgcccgctaaggaggacaagaagcggaaaggcgggcctggcgcagcgccggcg
gccaaaggaccggtcaagaagggcaagtttggagtcggcggtggcaagaagtaa
DBGET
integrated database retrieval system