Volvox carteri f. nagariensis: VOLCADRAFT_76537
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Entry
VOLCADRAFT_76537 CDS
T01330
Symbol
upf3
Name
(RefSeq) magnesium protoporphyrin chelatase
KO
K03403
magnesium chelatase subunit H [EC:
6.6.1.1
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00860
Porphyrin metabolism
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VOLCADRAFT_76537 (upf3)
Enzymes [BR:
vcn01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
VOLCADRAFT_76537 (upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CobN-Mg_chel
DUF3479
Motif
Other DBs
NCBI-GeneID:
9622075
NCBI-ProteinID:
XP_002955061
JGI:
76537
UniProt:
D8U8V7
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MQHQTLLGRRAAHPAAGLTTKPAVPSPRVASTRQVACNVATGPRPPMTTFTGGNKPGNKP
VSLDLRDEGTGLFTSTSPELRRVVPDNVNGRVTVKVVYVVLEAQYQSAITAAVKNINAKN
SKVCFEVVGYLLEELRDAKNFEALKQDVATANIFIGSLIFIEELAEKIVEAVKPLRDQLD
ACLIFPSMPAVMKLNKLGTFSMSQLGQSKSVFSEFIKSARKNNDNFEEGLLKLVRTLPKV
LKYLPSDKAQDARNFVNSLQYWLGGNSDNLENLLLNVCSSYVPALKGVDFSVAEPQQYPD
VGVWHPLAPMMYEDLKEYLNWYDTRKDMTFAKDAPVIGLVLQRSHLVTGDEGHYSGVVAE
LESRGSKVIPVFAGGLDFSSPVKKFFYDPLGSGRPFVDTVVSLTGFALVGGPARQDAPKA
IEALKALNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDGAIEPIVFAGRDS
NTGKSHSLPDRIASLCARAVNWARLRKKRNAEKRLAVTVFSFPPDKGNVGTAAYLNVFGS
IYRVLKNLQREGYDVGQLPPSEEDLIQSVLTQKEARFNSTDLHIAYKMKVDEYQRLCDYS
EALEENWGKPPGTLNTNGQELLIYGRQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGF
AAYYTYLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTIPNVYYYAANNPS
EATIAKRRSYANTISYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETA
RQCNLDKDVKLPEGEAKDLSMEDRDLIVGNVYRKLMEIESRLLPCGLHVVGCPPTAEEAV
ATLVNIAELDRPDNNPPIKGLPGILARAIGRDMEQVYSGNNKGILADVDCLQRITEACRA
CVREFVKDRTGLNGRIGTNFVTQLIKFTGFYVDPWVRALQNGEFAKADRQELITLFDYLE
FCLTQVVKDNELGALVEALNGQYVEPGPGGDPIRNPNVLPTGKNIHALDPQSIPTQAALK
SAKLVVDRLLDRERDNNGGKYPETIALVLWGTDNIKTYGESLAQVMMMVGVKPVPDALGR
VNKLEVIPLEELGRPRVDVVVNCSGVFRDLFVNQMLLLDRAIKLAAEQDEPDEMNFVRKH
AKQQAAELGLQSLRDAATRVFSNSSGSYSSNVNLAVENSSWSDESQLQEMYLKRKSYAFN
SDRPGAGGEMQRDVFEVAMKTVDVTFQNLDSSEISLTDVSHYFDSDPTKLVASLRNDGRT
PNAYIADTTTANAQVRTLGETVRLDARTKLLNPKWYEGMLASGYEGVREIQKRMTNTMGW
SATSGMVDNWVYDEANSTFIEDEAMAQRLMNTNPNSFRKLVATFLEANGRGYWDAKPEQL
ERLRQLYMDVEDKIEGVE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcagacgcttctcggccggcgcgccgcgcatccagcggcgggcctgaccacg
aagcctgctgtgcccagcccccgtgtggccagcacccgccaggttgcttgcaatgtggct
accgggccacggcctccgatgacgaccttcacaggcgggaacaagccaggcaataagcct
gtttcattggaccttcgtgatgaaggcactgggttgttcactagcaccagcccggagctg
cgccgtgtcgtcccggataacgtgaatgggcgtgtaacggtaaaagttgtgtacgtcgtg
ctggaggcccagtatcaatccgcaattaccgcggccgtaaagaacatcaacgcgaagaac
agcaaggtgtgtttcgaggtggttggttacctgctggaggagctccgcgacgcgaagaac
tttgaggcgcttaagcaggatgttgctaccgcgaatattttcatcggctctctcattttc
attgaggagctggctgaaaagattgtggaggctgttaagccccttcgcgaccagctggat
gcttgcctgatcttcccgtccatgccagctgttatgaagctgaacaagcttggcaccttc
tccatgtctcagctgggacagtcaaagtccgtgttttcggagttcatcaagtcggcccgg
aagaacaacgacaactttgaggagggtcttctgaagctggttcggactctgcccaaggtg
ctcaagtaccttccctcggataaagcccaggacgctcgcaactttgtaaacagtctgcag
tattggctgggtggaaactcggacaacctggagaacttgttgttgaatgtttgctcgtca
tatgtgcccgctctcaagggcgtggacttcagtgtagcagagccgcagcagtacccggat
gtgggtgtctggcatcctctggccccgatgatgtacgaggacctgaaagaatacctgaac
tggtacgacacccgcaaggacatgactttcgctaaggacgcgcctgtcattggtctggtg
ctccagcgctcgcatttggtgacgggtgacgagggtcactacagtggtgttgtagcggaa
ctggagagcaggggctctaaggttatcccggtctttgcaggtggcttggacttctcgtcg
ccggtgaagaagttcttttacgacccgctgggctcaggccgtcccttcgtggacacggtg
gtgtcgctgacgggattcgctttggttggtggccctgctcgccaagatgcccctaaggcc
attgaggctcttaaggccctcaatgtcccgtatctggtctccttgccgctggtcttccag
accacagaggagtggcttgacagcgagctcggcgtgcaccctgtgcaggtggctctgcag
gttgctcttcctgagctggacggcgctattgagcctattgtgtttgctggtcgcgactcc
aacacgggcaagtcgcactcattgccggatcggattgcctctttgtgtgctcgtgctgtg
aattgggcgcgtctgcgcaagaagcggaatgcggagaagcgcctggctgttacggtcttc
agcttcccgcctgacaagggcaatgtgggcacggcggcgtatttgaacgtattcggctct
atctaccgtgtgctgaagaaccttcagcgtgaaggctacgatgtgggtcagctgcccccg
tcggaggaggacctcattcagtcggtcctgacccagaaggaagcacgcttcaactcaact
gaccttcacattgcgtacaagatgaaggtcgacgagtaccagcggctctgcgactactcc
gaggcgctcgaggagaactggggcaagccaccgggtacgctgaacacaaatggccaggag
ctgctaatctacggccgccaatacggcaacgtcttcattggtgtacagccgacgtttggc
tacgagggcgacccgatgcgtctgctgttctcaaagagcgcttcgccgcatcacggcttc
gctgcctactacacctacctagagaagatcttcaaggccgatgcagtgctgcactttggc
actcacggctcgcttgagttcatgcccggcaagcaggtcggcatgtcaggcgtttgctac
cctgattccctaattggcaccatccccaacgtctactactacgctgcgaacaacccgtcg
gaggctaccatcgccaagcgccgctcttacgcgaacactatttcttaccttaccccgcct
gctgagaacgctggtctgtacaagggcctcaaggagcttaaggagctgattagcagctac
cagggcatgcgtgagagcggccgcgcagagcaaatctgtgccactatcattgagacggct
cgccagtgcaacctggacaaggatgtcaagctgcctgagggcgaagcaaaagatctgtca
atggaagaccgcgacctgatcgtgggcaacgtgtaccgcaagctgatggagatcgagtcg
cgcctgttgccatgcggcctgcacgtggtgggctgcccgcctacggccgaggaggcagtt
gctactctggttaacattgccgagctggaccgcccggataacaatccccccatcaagggc
ctgcctggcatcttggcgcgcgcaatcggccgcgacatggagcaggtctattcagggaac
aacaagggtattttggcagacgtcgactgcctgcagcgcattacagaggcttgccgtgcc
tgcgtgcgcgagtttgtgaaggaccgcacgggtctgaacggtcgcatcggcactaacttc
gtcacgcagctcattaagttcacgggcttctacgtggacccatgggtccgcgctctgcaa
aacggcgaattcgctaaggctgaccgccaggagctcatcactttattcgactacctcgag
ttctgcttgacgcaggttgtcaaggacaatgagctcggcgcgctggtggaggctctcaat
ggccagtacgtggagccaggaccaggcggcgatcctatccgcaaccctaacgttcttcca
acgggcaagaatatccacgctctcgacccccagtcgatcccaacccaggccgctttgaag
agcgctaagcttgttgtggatcgccttctcgaccgtgagcgcgacaacaacggcggcaag
taccctgagacaattgcgctggtcctctggggcacggacaacatcaagacttacggcgaa
tccctcgcccaggtaatgatgatggttggcgtcaagcctgtgccggatgcccttggtcgc
gtgaacaagctggaggtaattccgctggaggagctgggccgcccacgcgttgacgtcgtc
gtcaactgctcgggtgtcttccgcgacttgttcgtaaaccaaatgctgctcctggatcgc
gctatcaagctggctgcggagcaggatgagcctgatgagatgaacttcgttcggaagcat
gctaagcagcaggctgctgagttgggcctgcagagcctgcgcgatgctgccactcgtgtg
ttttcgaactcgtcgggttcttactcgtctaacgtcaacctggccgttgagaacagcagc
tggagcgatgagtcccagctgcaggagatgtatctgaagcgcaagtcgtatgccttcaac
tcggaccggccgggtgctggcggtgagatgcagcgcgacgtcttcgaagtggctatgaag
accgtcgacgtgacattccagaacctggattctagcgaaatctcactcacggatgtatcg
cactacttcgactccgaccccacgaagctggtggcttccttgcgcaacgacggccggact
ccgaatgcttatattgccgacaccaccacagcgaatgcgcaagtcaggacgctgggcgag
actgtccgcctcgacgcgcgcactaagctgctcaaccccaagtggtatgaaggtatgctt
gcctccggctatgagggtgtccgcgaaattcagaagcgcatgaccaacacgatgggctgg
tcggcgacgtcaggcatggtggacaactgggtttacgacgaggcgaactccacgttcatt
gaggacgaggcgatggcgcagcgtctgatgaacactaatccaaacagcttccgcaagctt
gtcgcgacgttcttggaggccaacggccgtgggtactgggacgccaagccggagcagctg
gagcggctgcggcagttgtacatggatgtggaggacaagatcgagggtgtcgagtaa
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