Volvox carteri f. nagariensis: VOLCADRAFT_76727
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Entry
VOLCADRAFT_76727 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_76727
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_76727
Transcription factors [BR:
vcn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
VOLCADRAFT_76727
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
VOLCADRAFT_76727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
HMG_box
SSrecog
HMG_box_2
HMG_WDHD1
YL1
DNA_pol_phi
CDC45
Motif
Other DBs
NCBI-GeneID:
9616740
NCBI-ProteinID:
XP_002955468
JGI:
76727
UniProt:
D8U9V6
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAEGVQAFGEIWLGSRGGVSSGQLKLTPAGFVWRRKQGGKNVEVKKEEVEGLSWTKVPRG
CQLSVRRKGATTLNFLGFRDKDLDALQHYARNALDHPEGISEEALSTSGHNWGAVQLRGA
SLAFMVGSKVAFELPLADVCTAQQMKDDVMLELHVDDTGGEVAEDMLQELAFYVPPGNEE
FPARGEDVPASKALLDALLPHADTEAAAADEPVCVFSEVGILAPRGRFDIEMHLGYLQLG
GQSQDFKVRYTSIQRIFILPKQNTPHTLVVISLDPPIRKGQTYYAHLLCQFPTEDDITVE
LDISEEALVSKNEKNGGKLSSEMSGPVHEVFAKLLRGLSGARITKPGHFRNAAGDGFSVR
CSYKADDGQLYPLDRGFFYVHKPPLLIPDNDIESVEFARQGSGAVSSSVRTFDLVIRLKG
GTEHMFRNIQRSEWGNLFEFINTKKIPIENLASAKRGPGGAHAGVDAEDDMDPGMRRAAA
EADYDEDDEDEDFDASGGSESSEDEDEDGESDAEMIEEEDGKGAAKGKGKGAAKADGAEG
AKPKKERKPKDPNAPKKNLTGFMYFSNANREKVKAENPGIAFGEIGKMLGERWKGMGADE
KAPYEQMAAKDKVRYAEAMKAYKERGGAAAGGKDGDGSDAGGDDE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggcgtgcaggcttttggagagatctggctgggaagcaggggtggcgtgtcg
tcgggtcaattaaagttaactcctgctggtttcgtttggcgacgaaagcaaggcggcaaa
aacgtcgaggtcaagaaggaggaagttgaaggtctctcgtggaccaaggtacctaggggt
tgccagctgagcgtgcgccgtaagggtgcaacaaccttaaacttccttggcttcagggac
aaggacctggacgccttgcagcattatgcccgtaatgcgcttgatcacccagaaggcatt
tcagaggaggcgctctccacgtcaggtcataactggggtgctgtccagctgcgtggcgcg
tccctggcctttatggttggcagcaaggtagcatttgagctgcccttggcggacgtgtgc
acagcacagcaaatgaaggatgacgtgatgctggagctgcatgttgacgatacgggtggc
gaggtggcagaggacatgctgcaggagctggcattctacgtgccgccaggaaacgaggaa
ttcccggctcgtggggaggacgtgccagcctccaaggctttgttggatgctcttttgccc
catgccgacacggaggcggctgctgcggacgagcccgtgtgcgtgttcagcgaggtgggc
atcctggcgccccgcggtcgcttcgatatcgagatgcatctgggctacctgcaactgggt
gggcagtcccaagacttcaaggtccgttacacctccatccagcgcattttcatccttccg
aaacagaacaccccgcacacgttggtggtcatctcgctggacccgcccattcgcaaaggc
cagacctactacgcgcacctgttgtgccagttccccacggaggacgacatcaccgtagag
ctcgacatatcggaggaggcgctcgtttccaagaacgagaagaatggtggcaagctgtct
tcagaaatgtctggacctgtgcacgaagtattcgccaagcttctgcgcggattgtcggga
gcccgcatcaccaagccgggacatttccgcaacgctgccggagacggcttctcagttcgc
tgctcctacaaggcggacgatggacagctgtacccgttggaccgcggcttcttctacgtc
cataaacccccgctgctcatcccagacaacgacattgagtccgtggagtttgcgcgccaa
ggcagcggtgccgtgtcgtcttccgtgcgcacattcgatctggttatccggctcaagggc
ggcactgagcacatgttcagaaacatccagcgctctgagtggggaaatctattcgagttt
atcaacacgaagaagattcctatcgagaatctggcttccgccaaacgtggccccggtggt
gcgcacgctggtgtggatgcggaggacgatatggacccaggtatgcgccgcgctgctgcg
gaggcggactatgatgaggatgacgaggacgaggacttcgacgccagcggaggcagcgag
agtagcgaggacgaggacgaagacggagagagcgacgcggagatgattgaggaggaagac
ggcaagggagcggccaagggtaagggcaagggggcggccaaggccgatggcgcggagggt
gccaagcccaagaaggagcggaagcctaaggatccgaatgcgcccaagaaaaacctcaca
ggttttatgtacttctccaacgccaatcgtgagaaggtcaaggcggagaatccaggtatc
gcctttggcgagattggcaagatgctgggtgagcgctggaagggcatgggcgcggatgag
aaggccccttacgagcagatggccgcaaaggacaaggtgaggtacgcggaggccatgaaa
gcttacaaggagaggggaggtgctgcggccggcggcaaggatggggatggaagcgacgct
ggtggagacgacgaatag
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