Volvox carteri f. nagariensis: VOLCADRAFT_76730
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Entry
VOLCADRAFT_76730 CDS
T01330
Symbol
dbp2
Name
(RefSeq) DEAD-box RNA helicase, ATP-dependent
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_76730 (dbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_76730 (dbp2)
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_76730 (dbp2)
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VOLCADRAFT_76730 (dbp2)
Spliceosome [BR:
vcn03041
]
Complex A
U1 snRNP components
U1 related factors
VOLCADRAFT_76730 (dbp2)
Complex B
VOLCADRAFT_76730 (dbp2)
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Helicases
VOLCADRAFT_76730 (dbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
9616608
NCBI-ProteinID:
XP_002955411
JGI:
76730
UniProt:
D8U9W5
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSHYSSYGGGRSDDRWGGSSYGGRSGGYGGSSYGGGGGGGGGGGSYGFNSRGGRDELDNM
ALPKPDFSNLPKFEKCFYLEHPAVGSRSSEQVEAFRRSKQIHVYGDGVPKPVTSFEEASF
PEYVLAEVIRAGFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPY
LQPGDGPIVLVLAPTRELAVQIQQECQRFGSSSRIKNTVVYGGAPKGPQARDLRSGVEIV
IATPGRLIDMMDSRVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSAT
WPKEVQAIARDFLKNPYQVIIGSPELKANHNIRQIVEMVEGYAKYPRLRKLLDTEMDGRR
ILIFCETKRGCDELVRQLRTDGYPALGLHGDKSQQERDWVLQEFKNGTHPIMLATDVAAR
GLDVKDIKVVVNYDMPKTAEDYVHRIGRTGRAGAHGTAYSFFTGADARLARQVVEVMQEA
GQQPPPELLQMTHLGGGGGGGFRSRGGGGGGGYRGFGGGASMTGANAIPVTQRRY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattacagcagctatgggggcgggcgcagtgatgaccgatggggtggctcatct
tacggtggccgctccggcggctatggcggtagcagctatggtggtggtggtggtggcggt
ggtggtggtggcagttatggtttcaattctcgaggaggccgggacgaactcgacaacatg
gcgcttccgaagccagacttctcgaacttgcctaagtttgagaagtgcttttacttggag
caccctgctgttggctcgcggagctctgaacaagtggaggcttttcggcgcagcaagcag
atccacgtctatggcgatggcgtgcccaagcccgttaccagttttgaagaggcttccttt
cctgaatacgttctagctgaggtcattcgtgctggcttcaaggagccgacgccaatccag
tgccagggttggcccatggcattgctgggacgtgaccttatcgggctggctgagacagga
agtggcaaaacccttgcctatctgctacctgctgttgttcacattaacgcgcaaccgtac
ctacaacctggtgacggtcctattgttctggttctcgcgcctacccgcgagctggccgtg
caaatccagcaggagtgccagcgcttcggcagctcttcacgtataaagaatactgtggtg
tatggcggcgctccgaaggggccgcaagcccgagacctgcgctccggtgtggaaattgtg
attgctacccctggccgcctgatcgacatgatggattcgcgagttaccaacctccggcgt
gtgacgtaccttgtgttggatgaggcggatcgcatgcttgacatgggctttgagccgcaa
atccggaaaattgtcgaccagattcgaccagaccgccagactttgctatggtcggccact
tggccaaaggaggtgcaggcgattgcccgcgacttccttaagaacccgtatcaggtcatc
attgggtctcctgaactgaaagcgaaccacaatattcggcaaatcgtggagatggtggaa
gggtatgcgaagtacccccgccttcgcaaattgcttgatacagagatggacgggcgccga
atcctaattttctgtgagacaaagcgaggctgcgacgagctcgtacgccagctgcgcact
gacggttaccctgctctgggcctccacggcgacaaaagtcagcaggagcgcgactgggtc
ttgcaggagttcaagaacggcacgcacccaataatgctcgccactgacgtggctgcacgc
ggactagatgtcaaggacatcaaggttgtggtcaattacgacatgcccaagacggcggag
gattacgtccaccggatcgggcgcacaggtcgcgctggtgcgcacggcacggcctattcg
ttcttcaccggcgccgacgcgcgcctcgcgcgtcaggtggtcgaggtgatgcaggaggct
gggcaacagccacctcccgagctgctccaaatgacgcacttaggtggaggcggcggcggc
gggttccgctcgcggggtggtggtggtggcggcggataccgcggcttcggtggcggtgca
agcatgaccggtgcgaacgccatcccagtgacgcagcggcgatattaa
DBGET
integrated database retrieval system
