KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_79082
Entry
VOLCADRAFT_79082  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11338  RuvB-like protein 2 [EC:5.6.2.3]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_79082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_79082
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:vcn03037]
    VOLCADRAFT_79082
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VOLCADRAFT_79082
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     VOLCADRAFT_79082
  Chromatin remodeling factors
   SRCAP complex
    VOLCADRAFT_79082
   INO80 complex
    VOLCADRAFT_79082
   INO80 complex (yeast)
    VOLCADRAFT_79082
   SWR1 complex
    VOLCADRAFT_79082
   ASTRA complex
    VOLCADRAFT_79082
Cilium and associated proteins [BR:vcn03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   VOLCADRAFT_79082
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N DnaB_C AAA_22 AAA_5 AAA_19 Mg_chelatase AAA_16 TiaS_TCKD ATPase AAA_25 Zeta_toxin TsaE AAA_7 Cdc6_lid nSTAND3 bpMoxR GvpD_P-loop SLFN-g3_helicase NACHT DUF4545
Other DBs
NCBI-GeneID: 9617615
NCBI-ProteinID: XP_002946545
JGI: 79082
UniProt: D8TJ41
LinkDB
Position
Unknown
AA seq 466 aa
MAAADVKVNAEVRDLTRIERIGAHSHIRGLGLDDALEARAVSQGMVGQAKARKAAGIILQ
MIKEGKIAGRAMLLAGQPGTGKTAIAMGMAKALGDETPFAMMTGSEIFSLEMSKTEALTQ
AFRKAIGVRIKEETEIIEGEVVEIEIDRPEGGNAAKTGRLTLKTTEMETIYDLGQKMIES
LTKEKVTAGDVITIDKASGRITRLGRSFARSRDYDAMGPSTKFVQCPEGELQKRKEVVHV
VTLHEIDVINSRTQGFLALFSGDTGEIRSEVREQIDAKVAEWREEGKAEIVPGVLFIDEV
HMLDIECFSFLNRALENDMAPILVTATNRGITRIRGTQYRSPHGVPIDLLDRLLIISTEP
YTEKEIRLILDIRCEEEDVEMSEDAKELLTKIGFETSLRYAIQLITAAAIVCQRRKGTEV
DIEDISKVYSMFVDVKRSTQFLIEYQEQYMFNEVPVGDGEEMETSL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggcggctgctgacgtgaaagttaacgcggaagtgcgcgacttaacgcggatagagcgc
ataggggcgcactcccacatccgtggtcttggtcttgatgatgcactggaagcgcgtgcc
gtgtcacaaggcatggttgggcaggccaaagcccgcaaggccgcgggaatcatcctacaa
atgattaaggaagggaaaattgcgggacgcgcgatgctgctagctggccagcctggtacg
gggaagacagccatcgccatgggcatggcaaaggcgttaggcgatgaaactccctttgcc
atgatgacgggttccgagatcttctccctggagatgtcgaaaacggaagcgctcactcag
gctttccgtaaagctatcggcgtccggatcaaagaggagacggagatcatcgagggtgag
gtggtggagatcgagattgaccggcccgagggcggcaacgcggcaaagacgggccgcttg
actctcaagaccacggagatggagaccatctacgacctcgggcagaagatgatcgagtcc
ctgaccaaggagaaggtcaccgcgggggatgtcatcacaattgacaaggcgtcaggccgc
atcacacggctgggtcgctcgttcgcaaggtcacgagactacgacgccatgggtccctcg
accaagtttgtgcagtgtcccgagggagagctccaaaagcggaaggaggtggtgcatgtg
gtcacgttgcacgagattgacgtcatcaatagccgtacgcagggcttcctggcgctgttc
tcgggggacacgggtgagatccggtccgaggtccgcgagcagatcgacgccaaggttgcg
gagtggcgggaggagggcaaggctgagatcgtgcctggtgtgctgttcattgacgaagta
cacatgctggacattgagtgcttctcattccttaacagggcactcgagaacgatatggcg
cccatcctggtgaccgccaccaaccgcggcatcacgcggatccgcggcacgcagtaccgc
tccccgcacggtgtccctatcgacctgctggaccgcctactcatcatttccacggagccg
tacaccgagaaggagatccgcctcatcctggatatcaggtgtgaggaggaggacgtggag
atgtcggaggacgctaaggagctgctgaccaagattggcttcgaaaccagtttgcgatat
gcgattcagctcatcacggcggcggccattgtgtgccaacggcgcaagggcacggaggtg
gacatcgaggatatcagcaaggtgtacagcatgtttgtggatgtaaagcgcagcacgcag
ttcctgatcgagtaccaggagcaatacatgtttaacgaggtgcccgtcggcgatggcgag
gagatggagacttctctatga

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