Volvox carteri f. nagariensis: VOLCADRAFT_79082
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Entry
VOLCADRAFT_79082 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VOLCADRAFT_79082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_79082
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_79082
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VOLCADRAFT_79082
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
VOLCADRAFT_79082
Chromatin remodeling factors
SRCAP complex
VOLCADRAFT_79082
INO80 complex
VOLCADRAFT_79082
INO80 complex (yeast)
VOLCADRAFT_79082
SWR1 complex
VOLCADRAFT_79082
ASTRA complex
VOLCADRAFT_79082
Cilium and associated proteins [BR:
vcn03037
]
Motile cilia and associated proteins
Dynein assembly factors
VOLCADRAFT_79082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
DnaB_C
AAA_22
AAA_5
AAA_19
Mg_chelatase
AAA_16
TiaS_TCKD
ATPase
AAA_25
Zeta_toxin
TsaE
AAA_7
Cdc6_lid
nSTAND3
bpMoxR
GvpD_P-loop
SLFN-g3_helicase
NACHT
DUF4545
Motif
Other DBs
NCBI-GeneID:
9617615
NCBI-ProteinID:
XP_002946545
JGI:
79082
UniProt:
D8TJ41
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAAADVKVNAEVRDLTRIERIGAHSHIRGLGLDDALEARAVSQGMVGQAKARKAAGIILQ
MIKEGKIAGRAMLLAGQPGTGKTAIAMGMAKALGDETPFAMMTGSEIFSLEMSKTEALTQ
AFRKAIGVRIKEETEIIEGEVVEIEIDRPEGGNAAKTGRLTLKTTEMETIYDLGQKMIES
LTKEKVTAGDVITIDKASGRITRLGRSFARSRDYDAMGPSTKFVQCPEGELQKRKEVVHV
VTLHEIDVINSRTQGFLALFSGDTGEIRSEVREQIDAKVAEWREEGKAEIVPGVLFIDEV
HMLDIECFSFLNRALENDMAPILVTATNRGITRIRGTQYRSPHGVPIDLLDRLLIISTEP
YTEKEIRLILDIRCEEEDVEMSEDAKELLTKIGFETSLRYAIQLITAAAIVCQRRKGTEV
DIEDISKVYSMFVDVKRSTQFLIEYQEQYMFNEVPVGDGEEMETSL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgacgtgaaagttaacgcggaagtgcgcgacttaacgcggatagagcgc
ataggggcgcactcccacatccgtggtcttggtcttgatgatgcactggaagcgcgtgcc
gtgtcacaaggcatggttgggcaggccaaagcccgcaaggccgcgggaatcatcctacaa
atgattaaggaagggaaaattgcgggacgcgcgatgctgctagctggccagcctggtacg
gggaagacagccatcgccatgggcatggcaaaggcgttaggcgatgaaactccctttgcc
atgatgacgggttccgagatcttctccctggagatgtcgaaaacggaagcgctcactcag
gctttccgtaaagctatcggcgtccggatcaaagaggagacggagatcatcgagggtgag
gtggtggagatcgagattgaccggcccgagggcggcaacgcggcaaagacgggccgcttg
actctcaagaccacggagatggagaccatctacgacctcgggcagaagatgatcgagtcc
ctgaccaaggagaaggtcaccgcgggggatgtcatcacaattgacaaggcgtcaggccgc
atcacacggctgggtcgctcgttcgcaaggtcacgagactacgacgccatgggtccctcg
accaagtttgtgcagtgtcccgagggagagctccaaaagcggaaggaggtggtgcatgtg
gtcacgttgcacgagattgacgtcatcaatagccgtacgcagggcttcctggcgctgttc
tcgggggacacgggtgagatccggtccgaggtccgcgagcagatcgacgccaaggttgcg
gagtggcgggaggagggcaaggctgagatcgtgcctggtgtgctgttcattgacgaagta
cacatgctggacattgagtgcttctcattccttaacagggcactcgagaacgatatggcg
cccatcctggtgaccgccaccaaccgcggcatcacgcggatccgcggcacgcagtaccgc
tccccgcacggtgtccctatcgacctgctggaccgcctactcatcatttccacggagccg
tacaccgagaaggagatccgcctcatcctggatatcaggtgtgaggaggaggacgtggag
atgtcggaggacgctaaggagctgctgaccaagattggcttcgaaaccagtttgcgatat
gcgattcagctcatcacggcggcggccattgtgtgccaacggcgcaagggcacggaggtg
gacatcgaggatatcagcaaggtgtacagcatgtttgtggatgtaaagcgcagcacgcag
ttcctgatcgagtaccaggagcaatacatgtttaacgaggtgcccgtcggcgatggcgag
gagatggagacttctctatga
DBGET
integrated database retrieval system