Volvox carteri f. nagariensis: VOLCADRAFT_79141
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Entry
VOLCADRAFT_79141 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
vcn03015
mRNA surveillance pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_79141
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_79141
03015 mRNA surveillance pathway
VOLCADRAFT_79141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_79141
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_79141
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
VOLCADRAFT_79141
Spliceosome [BR:
vcn03041
]
Common components
Common spliceosomal components
Cap binding complex
VOLCADRAFT_79141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
9624546
NCBI-ProteinID:
XP_002946588
JGI:
79141
UniProt:
D8TJC0
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MQVLNPAITQYRDRRFEGSETDWENALATSTTIYVGNLAFTTREEQLYDVFGRVGHIKRI
VMGLDKIQRTPCGFAFAIYYTRKDAEEAVAFLNGTLVDDRAIRVDLDWGFVEGRQYGRGR
SGGQVRDEFRQDYDPGRGGYGKLMQAEMMEQMGIGMDAGGGSRQDFKRQRTQGGHPGRAG
GGGAGGGGGGRDGAGGGPGGALQAAGGQEGEEVAGGGAGEGREGQQEQEQGGGEAGGDAA
GGAVEGHEAKGDGQDGQDIIPEDEDVIPVPADEHIFEGDDGLGA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcttgaatccggcaatcacacaatatagagataggcgcttcgaaggcagcgag
accgactgggagaatgcgctagcaacgagcacaacgatatatgtcggcaacctcgccttc
accactcgcgaggagcagctgtacgatgtgttcgggcgggtgggccacatcaagcgcatc
gtcatgggcctggacaagatccagaggaccccttgcggattcgccttcgccatctactac
accagaaaggacgcggaggaagcggtcgccttcctgaacggcaccctggtggacgaccga
gcgatccgtgtggatttggactggggcttcgttgaggggcggcagtacggtcgggggcgc
tcgggcggccaggtgcgtgacgagttccgtcaggattacgacccgggccggggcggctac
ggcaaacttatgcaggcggagatgatggagcagatgggtataggcatggacgcgggtggc
ggcagtcggcaggacttcaagcggcagaggacgcaaggcggccacccagggcgagctggc
ggtgggggtgccgggggcggcggtggcggcagggatggggccggcgggggccccggtggt
gctttgcaggcggcgggcgggcaggaaggcgaggaggtcgcaggcggaggtgctggagag
gggcgtgaggggcagcaggagcaggagcagggcggcggggaggctggtggggatgcggca
ggtggtgcggtggaggggcacgaggctaagggcgatggtcaggacggccaagacatcatc
ccggaggacgaggatgtaattccggtgcctgcggatgagcacatattcgagggtgatgat
gggttaggggcatag
DBGET
integrated database retrieval system