Volvox carteri f. nagariensis: VOLCADRAFT_79240
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Entry
VOLCADRAFT_79240 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcn04121
]
VOLCADRAFT_79240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcn04147
]
VOLCADRAFT_79240
Ubiquitin system [BR:
vcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
VOLCADRAFT_79240
Exosome [BR:
vcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VOLCADRAFT_79240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
HEAT_2
MMS19_C
mTOR_dom
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
9618398
NCBI-ProteinID:
XP_002946863
JGI:
79240
UniProt:
D8TKM3
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MANTTLVIILEKIASKDKDFRYMATSDLLHELQKDTFKADAELEKKLCAVVLNQLEDPSG
DISNLAVSCLGYLARKVAEVRAEDMVRQLCDKVAGAGPASGGSSAASKARDAQREIASIG
LKALIKELAGGAAAGVGANSQLVSSASTIIAGRMLEGLNIHKDDSEVVGHVLDILTELIQ
RFGGLLVSEHCRIRDALLGALGEGRLVMRKKALQGLAALSVFLNDDALESVVTYLLTALQ
APNAKADFVRTYIQAVGQISRAVGYRFGRYLATAVPLAISHCNKATEGDDELREHCLQAL
EGFVLRCPHDTRSQLDAVQAAALRYLRYDPNFAPDDEEGGDEDMGDDDEEADDDGDGDDA
DEYSDDEDMSWKVRRAATRIVSALVSRYPDALPALYRASMSDLVSRFDKEREEGVKADVF
AAVSEMLAQVGATADRYAPGDANSPTALLTGDVASIVRASAKQLRDKSPKTRVGVFGVLR
QLVAVQASSMSGQVDALVPGLLAALNDKSGNTGLKIEALSFLRQTIAATPPSVFQPHTKQ
LAPAVFGCVNERYYKVAAEALRVCEALVGVLRPDPAGPVPPEQASLVAPLYSAIMTRLSA
TDQDQEVKECAISAMAATAARLGDCLQKELPSVLRVLLDRLRNEITRLTAVKALTTLASS
PLVSGELLAGTVEGGSGVASELTSFLRKANRLLRQASLVALEALATRYPAAFEGPVLTAA
VEEAAALVSDADVALASLALRFLVSLTAMPGPAGAAAAAVVVDKVRGPALALVRSPLLQG
AALEVLQSFFAALATAAGPQGGADALLAALLDAGRSAEASSKQAQHSVARCVAALATTSP
AKVPAVVEMLLKSVGAKDSGSQRLALLCLGEIGGRADLSGLPAVAAAATGVLSAPGSSEE
VRAAASHALGGITRGNLHHFMPDLVAQIAAAAGLPKQQYLLLQVREDSLIRHGAGYGLGL
FRASVLSLLFNAAESEEECRNVVAECAGRLALLHPAKVLPALLERTTAASGNIRAVVVSA
VKHAVVDRPHPVDAELGPVLLRFLLLMGDEDRHVRRSAVVALSGCAHAKPGLVVGDLAQL
LPLLYAQTAVREDMIRTVDLGPFKHKIDDGLELRKAAFECLDILNDCCRDRLEPVPFLAA
LESGLGDHADVKMPCHTTLSKLVATDPGAVLAAADRLVVPLEKTLTTRLKSDAVKQEIDR
HEDMLRSCLRCVDALEHVPGSDNNVAFQNFLRKVVLATPALKEKYVAIQRERAEAEGGDA
MDTA
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacaactctggttatcattctggaaaagattgctagcaaggataaagatttt
cggtacatggcgacgtcggaccttctgcatgaactccaaaaggacacgtttaaggcagac
gcggagctggaaaagaagctctgcgccgtcgttctcaaccagttagaggatccatcgggc
gacatctcaaacctagcggtcagctgtctcggctaccttgctcgaaaagtagctgaggtc
cgtgctgaagacatggtgcggcagctgtgcgataaggttgcgggcgccgggccggcttca
ggaggcagcagcgccgccagcaaggcgcgggacgctcagcgcgaaattgcttctatcggc
ctcaaggctctcataaaggagctggcggggggagcggctgctggtgtgggcgcaaacagc
cagctcgtcagcagcgcgtccaccatcattgcgggtcgcatgcttgagggcctgaacatc
cataaggacgacagcgaggtggtgggtcacgtgctagatatcctcacagagctcattcag
cgcttcgggggcctgctggtttcggagcactgccgcatccgggacgcactgctgggcgct
ttgggcgaggggcgactggtcatgcgcaagaaggcgcttcagggcctggctgcactgtcc
gtgttcctcaatgatgacgcgctggagagcgtagtgacgtacctactgactgcgcttcag
gcgcccaatgccaaggcggattttgtgcgcacgtacatccaggcggtggggcagatcagc
cgtgccgtgggctaccgcttcggccgctacctcgccaccgctgtgccgctggccatttcc
cactgcaacaaggcgacagagggtgatgacgagctgcgggagcactgcctgcaggctctg
gagggctttgtgctgcgctgcccgcacgacacgcggtcgcagctggatgctgtgcaggcc
gctgcgctgcgctacctgcgctacgaccccaactttgccccggacgacgaggaaggcggt
gatgaggacatgggcgacgacgacgaggaggcagatgacgacggggatggagacgatgct
gacgaatactcggacgacgaagacatgagctggaaggtccgccgtgctgccacccgcatc
gtgtctgcgctggtgtcccgctaccccgacgcgctgccggcgctttaccgcgcgtccatg
tcggatctggtgtcccggtttgacaaggagcgtgaggaaggcgtcaaggcggacgtgttc
gcagccgttagcgagatgctggcgcaggtgggcgccaccgcagatcgctacgcgccggga
gacgccaacagccccaccgcccttctgaccggggacgtggcctccatcgtccgggcatct
gccaagcagctgcgcgataagtcacccaagacacgtgtgggcgtgttcggggtgttgagg
cagctggtggcggtgcaggcgtcgtccatgtcgggtcaggtggacgcgctggtgccgggg
ctgcttgccgctctcaacgacaagagcggcaacacgggtttgaagatcgaggcgctgagc
ttcttgcgtcagaccatcgccgcaaccccgccgtccgtgttccagccgcacaccaagcag
ctggcgcctgctgtgtttggctgtgttaacgagcggtactacaaggtggctgcggaggcg
ctccgagtgtgtgaggcgctggtgggagtcctgcggcccgaccccgccggcccggtgcca
ccagagcaggcatccctagtggcgccgctctactcggcaatcatgactcgcctcagcgct
accgaccaggaccaagaggtaaaagagtgcgcgatcagcgcgatggctgctaccgcggca
cgcttgggcgactgccttcaaaaggagctaccttcggttttgcgggtgctgctagaccgt
ctgcgcaacgagatcacgcgcctcaccgccgtcaaggcgctcaccacgctggcgtcgtcg
ccactggttagcggcgagttgctggcaggcacggtcgaggggggcagtggcgtggcgagc
gagctgacgtccttcctgcgcaaggcaaaccggctcctgcgccaggcgtcgctagtggcg
ctggaggctctggcaactcgctacccggccgcttttgagggtcctgtcctcaccgcagcc
gtagaggaggctgccgcactggtgtcggatgctgacgtggcgctagcgtcgctggcactt
cgcttcctggtgtcgctgacggccatgccgggacccgcgggcgccgcagcagctgcagtg
gtggtggacaaggtgcgcggtccggcactggcactggtgcgcagcccgctgctacaaggg
gccgcgctggaggtgctgcagagcttcttcgcggcgctagccactgccgcggggccgcaa
ggcggggcagatgcgctgctggcggcgctgctcgacgcgggacgcagcgcggaggcgtcg
tccaagcaggcccagcatagtgtggcgcgatgcgtggcagctcttgccaccacgagcccc
gccaaggttcccgctgtcgtggagatgttgctcaaaagcgtgggggccaaggattctgga
tctcagcgcttggcgctgctgtgcctcggcgagatcggcggccgtgctgacctatcaggc
ctgcctgccgtggcagccgctgccacgggggtgctgtccgcgcccggctcttctgaagag
gtccgcgccgccgcctcacacgccctgggaggcattacccgaggcaacctacaccacttc
atgccggaccttgtggcccaaatcgcggcagcggccgggctacccaagcaacagtacctg
ctgctgcaggtccgtgaagacagtttaataaggcacggggctggctacgggctaggcttg
tttcgtgcgagcgtcctatcgctgctcttcaacgctgcggagagtgaggaggaatgccgc
aacgttgtggccgagtgcgcgggccgcctggcactgctgcacccggccaaggtgctgccg
gcgctgctggagcggaccaccgccgcctcgggaaatatacgcgctgtggtggtttcggcg
gtgaagcacgcggtggtggaccggcctcaccccgtggacgccgagctgggacctgtgctg
cttcgcttcctgctgcttatgggcgacgaggaccgccatgtgcgccgctcggcggtggtg
gcgctgtcgggctgcgcacacgccaagccgggcctggtagtgggcgacctggcgcagctg
ctgccactgctgtacgcgcagacggcggtgcgcgaggacatgatccgcactgtggacttg
ggaccttttaagcacaagatcgatgacggtctggagttgcgcaaggcggcgttcgaatgc
ttggacattctcaatgactgctgccgcgatcgtctggaaccggtgcccttcctggcggcg
ctggagagcgggctcggggatcacgcggacgtcaaaatgccctgccacaccacgctgtct
aaactggtggctaccgatccgggtgccgtactggcggcggcggaccggctggtggtgcct
ctggagaagactctcaccacgcgtctcaagagtgatgccgtcaagcaggagatcgaccgg
catgaggacatgctgcgcagctgccttcgctgcgtggacgctctggagcacgtgcccggc
agcgacaacaacgtggccttccagaatttcttgcgcaaggtcgtgctggcgacgcccgct
ctcaaggagaagtatgtggccattcaacgtgagcgtgctgaggcggagggcggcgacgca
atggatacagcgtag
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