Volvox carteri f. nagariensis: VOLCADRAFT_79766
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Entry
VOLCADRAFT_79766 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_79766
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VOLCADRAFT_79766
Spliceosome [BR:
vcn03041
]
Complex C
Other components
Complex C specific factors
VOLCADRAFT_79766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_30
AAA_19
HA2_N
ATPase
PCC_BT
PEX14-like_2nd
nSTAND3
AAA_7
DUF7701
AAA_23
Cas3-like_C_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
9624877
NCBI-ProteinID:
XP_002947709
JGI:
79766
UniProt:
D8TME9
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MNPTYRYGDSSLPVSRYRRQILYLVENHATTIIVGETGSGKTTQVPQFLFEAGWAENGFC
IAVTQPRRVAATTIAARVAEEMGCDLGTTVGYAVRFDNALTAGRTRIKYLTDGVLLREML
DDPLLTSYSVIIVDEAHERSLSTDMLLGLLKKVSGEGMLHVFVQRRRPDLRVIISSATLE
ATKLKDFFDTGTATTAAQRRVAAAAAAAAAAAAAAAATSSGGTAAPSPPRDPHRTPAVIT
VEGRTHPVQVHYLEHPAPDYTRAAVEAAVAIHCEDLPGDILIFLTGQEEIQAAIGLLEEH
ARRLAGSRGYSLKLMPLPLYAGLPGAQQQAVFRSTPRGYRKVVAATNIAETSLTLEGVVY
VIDCCFVKQRCYNPLTGLESLLIAPLSKASAAQRAGRAGRMRAGHCFRLCMEADFAAKLP
EVTVPEMQRSNLVGMVLQLKALGIDNVLKFEWLAPPPAEALVRALEELHALKVIDEDARL
TRDVGLALAALPLEPGLGAALLASRSLGCCEEMLTLAAMMSVQHVWAPAQGAIRALEEAK
AKFAAAEGDGVTLLNVHRAWRANGRSAAWAQRHFLNHHALFRADEARDQLQGLLRRHGLL
PQDKPPPSCERDMEPVCRALAAGLFMNAAVFDRTEYNPLAPEGDPGTHVFRLVRYTAQRT
HPIKLRIHNSSVLWRSIPSCVVYNTVQQSDNGWYEMQGVTAVQPDWLIELAPHIFHKPSH
TAV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaacgtatcgctatggagactcctcccttcccgtgtcgcgataccggcgacag
atcttgtatcttgtggagaatcacgccacaacaattatcgtcggcgaaacgggcagcgga
aaaactacgcaggtaccgcaatttctatttgaggccggctgggcggagaacggcttctgc
attgcagtcacgcagcctcgccgtgttgctgccacgacgattgcggcgcgtgtggcggag
gagatgggctgcgacttgggtacgacagttggatatgccgtacgcttcgacaatgcattg
actgcgggccgcacacgtatcaagtacctgaccgacggagtgctgcttagggagatgctg
gacgacccacttctcacgtcgtacagcgtcatcattgtggacgaagcgcacgagcgcagc
ttgtcgactgacatgctgctcgggctgctaaaaaaggttagtggagaaggtatgctccat
gtgttcgttcaacgacggcgtcctgatctgcgcgtcatcatttcatctgccacgctggaa
gcgacgaagctgaaggactttttcgacacaggaacagctacgacagccgcgcagcggcgg
gtggcggcggcggcagcggcagccgccgctgctgctgctgctgctgctgccacatcgagc
ggcggcacagcggcgccatcaccaccacgcgatccgcaccgtacgccggcagttattacg
gttgaaggtcgcactcatcccgtacaggttcactatctggagcaccctgcacctgattac
acgagggcagcggtggaggcggcggtggccatccattgcgaggacctgccgggcgacatc
ctcatcttcctgacggggcaggaggagatccaggctgctattgggctgctagaggaacac
gcgaggaggctggcgggcagtcggggctacagcctcaaactgatgcctctacccctgtat
gcgggcttgcctggcgcccagcagcaggcggtgtttcggagcacacctcgcggctatcgg
aaggtagtcgcggcgaccaacatcgcggagacgtcgctgaccctggaaggtgttgtctac
gttatagattgctgtttcgtgaagcagcgctgttacaacccccttacgggattggaatct
ctgctgatagcaccgctgtccaaggcctccgcggcacagagggccggcagggcggggcgg
atgagggcggggcactgcttcaggctctgtatggaggcggactttgcggcgaagctgcca
gaggtgacggtgccagagatgcagcgaagcaatctcgttggcatggtactgcagcttaaa
gctctaggcattgacaacgtgctgaagtttgagtggctggcgccgccgcctgcagaggcc
ctcgtccgcgcgcttgaggagctgcatgcgttgaaggttattgatgaggacgccaggctg
actcgcgatgtgggccttgcgctggctgccctccccctggagccgggcctgggtgcggcg
ctgctggcgtcccggagcttgggctgctgtgaggagatgctcaccttggcggccatgatg
agcgtacagcatgtgtgggcgcctgcgcaaggagcaatacgcgcgctggaggaggccaag
gccaagttcgcggctgcagagggcgacggtgtgacgttgcttaatgtgcaccgagcctgg
agagccaacgggcggtctgctgcttgggcccagcgccacttcctcaaccaccacgcgctc
ttccgggctgacgaggcgcgagaccagctgcagggcttgctgcggcgccacgggctatta
ccgcaggacaagccaccacccagctgcgagcgggacatggagcccgtgtgccgtgctctg
gcagcgggcctgtttatgaacgccgccgtatttgaccgcaccgagtacaatcccctggct
ccggagggagatcccggcacgcatgtgtttcggcttgtacggtacacggctcagcgaacc
cacccaatcaagctccgaatccacaacagcagtgtactgtggcgcagcataccgtcgtgc
gtcgtgtacaataccgtacagcagtcggacaacggatggtacgagatgcagggagtcact
gccgtacaacctgattggctcatcgaactggcaccgcacatcttccataagcccagtcac
acggcggtgtga
DBGET
integrated database retrieval system
