Volvox carteri f. nagariensis: VOLCADRAFT_80220
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Entry
VOLCADRAFT_80220 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12859
U5 snRNP protein, DIM1 family
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_80220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_80220
Spliceosome [BR:
vcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
VOLCADRAFT_80220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_8
Thioredoxin_7
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
9625196
NCBI-ProteinID:
XP_002948591
JGI:
80220
UniProt:
D8TQ37
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGYAVDQAILAEEDRVVIIRFGHDWEPNCMQMDEVLASVSDQIKNFAVIYL
VDITEVPDFNTMYELYDPCTIMFFFRNKHIMIDLGTGNNNKINWAMTDKQEFIDIVEVVY
RGARKGRGLVVSPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacctgctgccccacttgcatagtgggtatgcagtggaccaagcaatccttgca
gaagaggatcgtgtcgtgattatccgctttggacatgattgggagcccaactgcatgcag
atggacgaggtccttgcttcagtctctgaccagatcaagaactttgcggtaatctatttg
gttgacattactgaggtcccagacttcaacaccatgtacgagctctacgatccgtgcaca
attatgttcttcttcaggaacaagcacatcatgattgacttgggcacgggtaataacaac
aagattaactgggcgatgactgataagcaggaattcatcgacatagtggaagtggtgtac
aggggggcgcgaaaggggcgtggtctggtggtgtcaccaaaggactactctactaagtac
cggtattaa
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integrated database retrieval system