Volvox carteri f. nagariensis: VOLCADRAFT_80657
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Entry
VOLCADRAFT_80657 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_80657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_80657
Spliceosome [BR:
vcn03041
]
Common components
Common spliceosomal components
SR proteins
VOLCADRAFT_80657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DbpA
RRM_5
DUF1866
Motif
Other DBs
NCBI-GeneID:
9618560
NCBI-ProteinID:
XP_002949504
JGI:
80657
UniProt:
D8TSP6
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MRYKEDGDEAVRRLDRTEWGYKRRQLRVEWAQKTEADRKRDTRPSKTLFVVNFDVRRTSE
RDIERYFSRFGRLSRVQIKKNYSFVQFVDVESAVRALERSNGAQMDGRTLAVEFVQVRIP
WDTFGSSRTVMPISVVTRA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgatataaggaggatggtgatgaagctgttagacgcctggatcggactgaatggggc
tacaagcgcaggcaactacgtgtggagtgggcgcagaaaacagaagctgaccggaagcgc
gacacccgcccatccaaaacgctcttcgtcgtaaacttcgatgtacggcggacgtcggaa
cgcgacattgagcgttatttctcccgtttcggacggttgtcgcgcgtacagataaagaag
aactatagcttcgtgcagtttgtggacgtggaatccgcagtgcgggccctggaacggagc
aatggtgcccagatggacggccgcacactggctgtggaattcgtgcaggtgagaattccc
tgggataccttcggctcctcgaggactgttatgccgatttccgttgttactcgagcataa
DBGET
integrated database retrieval system