KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_81183
Entry
VOLCADRAFT_81183  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K02328  DNA polymerase delta subunit 2
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03030  DNA replication
vcn03410  Base excision repair
vcn03420  Nucleotide excision repair
vcn03430  Mismatch repair
vcn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VOLCADRAFT_81183
   03410 Base excision repair
    VOLCADRAFT_81183
   03420 Nucleotide excision repair
    VOLCADRAFT_81183
   03430 Mismatch repair
    VOLCADRAFT_81183
   03440 Homologous recombination
    VOLCADRAFT_81183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_81183
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_81183
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    VOLCADRAFT_81183
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      VOLCADRAFT_81183
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     VOLCADRAFT_81183
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N Elong-fact-P_C
Other DBs
NCBI-GeneID: 9617694
NCBI-ProteinID: XP_002950575
JGI: 81183
UniProt: D8TW70
LinkDB
Position
Unknown
AA seq 514 aa
MQMMDLEGPQSSQGLTARYDELLAPVTSKDNDTSFNRASATYSNLDDRFRAAKRSYERQY
AQLYFSRLMLLKEVMLARVQQLWPGVPVCTILEVPESKEVAVIGTVYKNMKLKPSILDEY
SKDRGLKAALGAANFCSGDDSLVLEDEGARMVLRDVAGPGPAGGSTTSGGGSEPLNVQEI
VTGLVLAVRGVHEPGGDFIVNAVCFPGMAPNPHPLPAPVPHRAAAATAAVVAAGAPGDKY
VALASGFCLGSSKADMLKTQLALDFLTGNLGSPVEQQLSAQIVRLVVAGGCIGQLEALAG
GGGGGSGSSNPYNRQAQGVALQPVRDLDLLLAELSAGMSVDVMPGAEDPANVALPQQPMH
RCLFPAAGMQGSFVRATNPHEFESDGVRLLGCSGQNVDDMAKYCGIRDRLDIMQRSVESR
HIAPTAPDTLTCYPFHDKDPFILETTPHVYFVGNQPEFATRLLGGGSAAGAAAAAGPVVR
LVTVPSFVRTGTIVLINLRTLACHPLRFDGTLGL
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgcaaatgatggaccttgaaggcccccaaagttcccaagggcttaccgccaggtacgat
gagctgctggcgcctgtgacttcaaaggacaacgatactagttttaaccgggcttcagct
acgtactcgaatcttgatgatcgcttccgcgccgcaaagcgctcctatgagcggcagtat
gcacagctttacttctctcgcctcatgctgcttaaggaggtcatgcttgcccgggtgcag
cagctctggcccggcgttccagtgtgcaccatcctggaggtcccggagagcaaggaggtg
gccgtcatagggactgtgtacaagaacatgaagctcaagcccagtattctggatgagtac
tccaaggaccggggcctgaaggccgccctgggcgcagctaatttctgcagcggcgacgac
agcttggtactggaggatgagggggcgcgcatggtgctgcgggacgtggcggggccgggc
ccggccggcgggtcgaccacctcggggggtggcagcgagccgctcaacgtgcaggagatc
gtgactgggttggtgctggcggtgcggggtgtgcacgagcccggcggcgacttcattgtc
aacgccgtgtgcttccctggcatggcgcccaacccgcacccgctgccggcgccggtgccg
caccgtgcggcggcagcaacagcagctgtggtggctgctggggcacccggtgacaagtac
gttgctctggcctcggggttctgccttgggtcgagcaaggcggatatgctcaagactcaa
ctggcgctggacttcctgactggcaacctgggcagccccgtggagcagcagctcagtgca
cagattgtgcggctggtggtcgcgggcggctgcattggccagttggaggcgctggcgggt
ggcggcggcggcggtagcggctcgtccaatccttacaaccgtcaagcgcagggcgtggcg
ctgcagcccgtgcgcgacctggacctcctcctggcggagctgtctgcgggcatgtcggtg
gacgtgatgccaggggcagaggaccccgctaacgtcgcactcccgcaacagcccatgcac
aggtgtcttttccctgcggctgggatgcaaggctccttcgtgcgcgccaccaatcctcac
gagttcgagtcggacggtgtgcgcttgttgggttgcagcggccagaatgtggacgacatg
gccaaatactgcggcattcgggataggttggacatcatgcaacgctctgtggagagtcgc
cacatagcccccaccgcccccgacaccctcacctgctaccccttccacgacaaggatccc
ttcatcttggagaccactccgcacgtctactttgtgggcaaccagcctgaattcgcgaca
aggctgttgggtggcgggtcggcggcaggagcagcagcagctgcagggcccgttgtgcgg
ttggtgacagtgcccagttttgtgcgcacggggacgatcgtgctgatcaaccttcggacg
ttggcgtgccatccgcttcggttcgacggcactttgggtttgtaa

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