Volvox carteri f. nagariensis: VOLCADRAFT_81277
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Entry
VOLCADRAFT_81277 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10409
dynein axonemal intermediate chain 1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
VOLCADRAFT_81277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_81277
04812 Cytoskeleton proteins [BR:
vcn04812
]
VOLCADRAFT_81277
Cilium and associated proteins [BR:
vcn03037
]
Motile cilia and associated proteins
Dynein arm
VOLCADRAFT_81277
Cytoskeleton proteins [BR:
vcn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
VOLCADRAFT_81277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
9618150
NCBI-ProteinID:
XP_002950904
JGI:
81277
UniProt:
D8TWW0
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MPGPAPAKKPLEKGKGKKKVIEQAQAVDYVPPPPPMPGDEAFAMPIREIVKPDNQLKLSE
ADLNEEVAKMLTANNPAAPKNIVRFNMKDKVYKLEPMVEQTVVHYATDGWLLHKSSDEAK
RQLDMEKMEQEASARFQADLDRASHEHKEHGDVEPPDDSRQLRNQFNFSERAAQTLNYPL
RERETFTEPPPTATVSGVCMQWEIYDEYIKDLERQRLDEAAKTRGAKKHQAATQHSGTAS
KQQEHVPTLQSQALLHSLGTLDRMVNQNMFEEVAMDFKYWDDASDAFRPGEGSLLPLWKF
ASEKSKRRQVTSICWNPMYDDMFAVGYGSYEFLKQASGLINIYSLKNPSHPEYTFHTESG
VMCVHFHPEYANLLAVGCYDGTVLVYDVRLRKDEPIYQASVRTGKHNDPVWQVVWQVDEA
QKALHFVSISSDGNVNLWTLTKSELIPECLMKLRVVKAGETSEEDPTASGPAGGCCMDFC
KMPGQESIYLVGTEEGAIHRCSKAYSSQYLSTYVAHHLAVYAVSWNHIHPNMFLSSSADW
TIKLWDVHDSKRPVMNFDLNDSIGDVAWAPYSATVFAAVTDDGRVHVFDLAQNKLLPLCS
QKVVKKAKLTKLVFNPKQPIVLVGDDKGAVTSLKLSPNLRITSKPEKGQKFDDLEIAKLD
AVVEIARKSDADLGKH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaccggctccagccaagaagcccctggaaaaggggaagggcaagaagaaggtc
attgagcaggcgcaggctgtggactatgttcctcccccgccccctatgcccggcgatgag
gcattcgccatgccaattcgtgaaatcgttaagccggataaccagctgaagttgagcgaa
gcggacctcaatgaggaagtggcgaaaatgctgacagccaacaatccagcggcaccaaag
aacattgttcgcttcaacatgaaggacaaggtgtataagctggagccgatggtggaacag
accgttgtacactacgctaccgacggttggctcctccacaaaagctccgacgaagccaag
cgccagctggatatggagaaaatggagcaggaggcgagtgcccgcttccaggccgacctc
gatcgcgctagccacgagcataaggagcacggggacgtggagcccccggatgactcccga
cagctgcgcaaccagtttaacttcagcgagcgcgccgcacagacgctcaactatcctctg
cgtgaacgggaaactttcacggagcctcccccaaccgctacggtgtcaggggtttgcatg
caatgggagatatatgatgagtacattaaggacctggagcgccagcggctggatgaggcg
gcgaagacgcgcggtgccaaaaagcaccaggcggcgacacagcacagtggcacagcttcc
aagcagcaggagcatgtgcccaccctgcagagccaggcactgctgcacagcctgggcacg
ctagaccgcatggtgaaccagaacatgttcgaggaagtggccatggacttcaagtattgg
gacgacgcatcagatgccttcagacccggggaaggctccctgctgccactgtggaaattc
gcgtcagaaaagtccaagcggcgacaggtcaccagcatctgctggaaccccatgtatgac
gacatgtttgcggttggttacggcagctacgagtttctgaagcaggccagcggcctcatc
aacatctactcgcttaagaatccatcccatcccgagtacacctttcataccgagtcgggc
gtcatgtgcgtacacttccatccggagtatgccaacctgctggcggtggggtgctacgac
ggcaccgtgctggtgtacgacgtacggctcaggaaggacgagccgatctaccaggcgtcc
gtgcggacgggcaagcacaacgacccagtgtggcaggtggtgtggcaggtggatgaggcc
cagaaggctctccacttcgtgtccatctccagtgacggcaacgtcaacctgtggacgctc
accaagtcggagctcatacccgagtgtctcatgaagctgcgagtggtgaaggcaggggag
accagtgaggaggaccccacagcgtcggggccggcggggggttgctgcatggacttctgc
aagatgcccggccaggagtctatctacctggtgggcacggaagagggcgccatccaccgc
tgctccaaggcctacagctcccagtatctgtccacctacgtagcgcaccacctagcggtc
tatgcagtcagctggaaccacatccaccccaacatgttcctttcgtcctccgcggactgg
acaatcaagctatgggacgtgcatgactccaagcggcccgtcatgaacttcgatctgaac
gactcaatcggtgatgtggcttgggcgccctactcggccacggtgttcgcggcggttacc
gacgacgggcgggtgcacgtgtttgacctggcgcagaacaagctgctgccgctttgcagt
caaaaggtggttaagaaggccaaactgaccaagttggtgttcaaccccaagcagcccatc
gtgctggtgggtgacgacaagggcgccgtcacttccctcaagctcagtccgaacctgcgg
ataacgtccaaaccagagaagggacagaagttcgacgacctggaaattgccaaactggac
gcggtggtggagattgcgcgaaagagtgacgcggacctgggcaagcactaa
DBGET
integrated database retrieval system