KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_81277
Entry
VOLCADRAFT_81277  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10409  dynein axonemal intermediate chain 1
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    VOLCADRAFT_81277
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:vcn03037]
    VOLCADRAFT_81277
   04812 Cytoskeleton proteins [BR:vcn04812]
    VOLCADRAFT_81277
Cilium and associated proteins [BR:vcn03037]
 Motile cilia and associated proteins
  Dynein arm
   VOLCADRAFT_81277
Cytoskeleton proteins [BR:vcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     VOLCADRAFT_81277
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RSE1_2nd Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_LRRK2 Beta-prop_TEP1_C PEP5_VPS11_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 9618150
NCBI-ProteinID: XP_002950904
JGI: 81277
UniProt: D8TWW0
LinkDB
Position
Unknown
AA seq 676 aa
MPGPAPAKKPLEKGKGKKKVIEQAQAVDYVPPPPPMPGDEAFAMPIREIVKPDNQLKLSE
ADLNEEVAKMLTANNPAAPKNIVRFNMKDKVYKLEPMVEQTVVHYATDGWLLHKSSDEAK
RQLDMEKMEQEASARFQADLDRASHEHKEHGDVEPPDDSRQLRNQFNFSERAAQTLNYPL
RERETFTEPPPTATVSGVCMQWEIYDEYIKDLERQRLDEAAKTRGAKKHQAATQHSGTAS
KQQEHVPTLQSQALLHSLGTLDRMVNQNMFEEVAMDFKYWDDASDAFRPGEGSLLPLWKF
ASEKSKRRQVTSICWNPMYDDMFAVGYGSYEFLKQASGLINIYSLKNPSHPEYTFHTESG
VMCVHFHPEYANLLAVGCYDGTVLVYDVRLRKDEPIYQASVRTGKHNDPVWQVVWQVDEA
QKALHFVSISSDGNVNLWTLTKSELIPECLMKLRVVKAGETSEEDPTASGPAGGCCMDFC
KMPGQESIYLVGTEEGAIHRCSKAYSSQYLSTYVAHHLAVYAVSWNHIHPNMFLSSSADW
TIKLWDVHDSKRPVMNFDLNDSIGDVAWAPYSATVFAAVTDDGRVHVFDLAQNKLLPLCS
QKVVKKAKLTKLVFNPKQPIVLVGDDKGAVTSLKLSPNLRITSKPEKGQKFDDLEIAKLD
AVVEIARKSDADLGKH
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgcctggaccggctccagccaagaagcccctggaaaaggggaagggcaagaagaaggtc
attgagcaggcgcaggctgtggactatgttcctcccccgccccctatgcccggcgatgag
gcattcgccatgccaattcgtgaaatcgttaagccggataaccagctgaagttgagcgaa
gcggacctcaatgaggaagtggcgaaaatgctgacagccaacaatccagcggcaccaaag
aacattgttcgcttcaacatgaaggacaaggtgtataagctggagccgatggtggaacag
accgttgtacactacgctaccgacggttggctcctccacaaaagctccgacgaagccaag
cgccagctggatatggagaaaatggagcaggaggcgagtgcccgcttccaggccgacctc
gatcgcgctagccacgagcataaggagcacggggacgtggagcccccggatgactcccga
cagctgcgcaaccagtttaacttcagcgagcgcgccgcacagacgctcaactatcctctg
cgtgaacgggaaactttcacggagcctcccccaaccgctacggtgtcaggggtttgcatg
caatgggagatatatgatgagtacattaaggacctggagcgccagcggctggatgaggcg
gcgaagacgcgcggtgccaaaaagcaccaggcggcgacacagcacagtggcacagcttcc
aagcagcaggagcatgtgcccaccctgcagagccaggcactgctgcacagcctgggcacg
ctagaccgcatggtgaaccagaacatgttcgaggaagtggccatggacttcaagtattgg
gacgacgcatcagatgccttcagacccggggaaggctccctgctgccactgtggaaattc
gcgtcagaaaagtccaagcggcgacaggtcaccagcatctgctggaaccccatgtatgac
gacatgtttgcggttggttacggcagctacgagtttctgaagcaggccagcggcctcatc
aacatctactcgcttaagaatccatcccatcccgagtacacctttcataccgagtcgggc
gtcatgtgcgtacacttccatccggagtatgccaacctgctggcggtggggtgctacgac
ggcaccgtgctggtgtacgacgtacggctcaggaaggacgagccgatctaccaggcgtcc
gtgcggacgggcaagcacaacgacccagtgtggcaggtggtgtggcaggtggatgaggcc
cagaaggctctccacttcgtgtccatctccagtgacggcaacgtcaacctgtggacgctc
accaagtcggagctcatacccgagtgtctcatgaagctgcgagtggtgaaggcaggggag
accagtgaggaggaccccacagcgtcggggccggcggggggttgctgcatggacttctgc
aagatgcccggccaggagtctatctacctggtgggcacggaagagggcgccatccaccgc
tgctccaaggcctacagctcccagtatctgtccacctacgtagcgcaccacctagcggtc
tatgcagtcagctggaaccacatccaccccaacatgttcctttcgtcctccgcggactgg
acaatcaagctatgggacgtgcatgactccaagcggcccgtcatgaacttcgatctgaac
gactcaatcggtgatgtggcttgggcgccctactcggccacggtgttcgcggcggttacc
gacgacgggcgggtgcacgtgtttgacctggcgcagaacaagctgctgccgctttgcagt
caaaaggtggttaagaaggccaaactgaccaagttggtgttcaaccccaagcagcccatc
gtgctggtgggtgacgacaagggcgccgtcacttccctcaagctcagtccgaacctgcgg
ataacgtccaaaccagagaagggacagaagttcgacgacctggaaattgccaaactggac
gcggtggtggagattgcgcgaaagagtgacgcggacctgggcaagcactaa

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