KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_81522
Entry
VOLCADRAFT_81522  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_81522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_81522
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_81522
Spliceosome [BR:vcn03041]
 Complex A
  U1 snRNP components
   Sm proteins
    VOLCADRAFT_81522
  U2 snRNP components
    VOLCADRAFT_81522
 Complex B
  U1 snRNP components
    VOLCADRAFT_81522
  U4/U6.U5 tri-snRNP components
    VOLCADRAFT_81522
 Complex C
  U2 snRNP components
    VOLCADRAFT_81522
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     VOLCADRAFT_81522
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9615699
NCBI-ProteinID: XP_002951534
JGI: 81522
UniProt: D8TYN8
LinkDB
Position
Unknown
AA seq 110 aa
MAAAPQPTVDELEKKEEDEYRTGPLSVLTQSVKTNGQVLINCRNNHKLLARVKAFDRHCN
MILENVKEMWTEIPKTGKGSKGSRPVNKDRFVSKMFLRGDSVIMVLRNPK
NT seq 333 nt   +upstreamnt  +downstreamnt
atggccgctgcaccacaacccactgttgatgaactagagaaaaaggaggaggacgagtac
cgcactgggccgctatcggtcttaactcagagtgtcaagactaacggacaggtgctcatc
aactgccggaacaaccacaagctacttgcaagggtgaaggcgtttgatcggcattgcaat
atgattttggagaacgtcaaggagatgtggacggagattccgaagacggggaagggctcc
aagggctccaggccggtcaacaaggaccgctttgttagcaagatgtttttgcgaggagac
tctgttattatggttctgcgcaacccgaaatag

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