KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_82285
Entry
VOLCADRAFT_82285  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03020  RNA polymerase
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VOLCADRAFT_82285
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_82285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_82285
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_82285
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VOLCADRAFT_82285
  RNA polymerase III system
   RNA polymerase III
     VOLCADRAFT_82285
  RNA polymerase I system
   RNA polymerase I
     VOLCADRAFT_82285
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VOLCADRAFT_82285
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 9625856
NCBI-ProteinID: XP_002953439
JGI: 82285
UniProt: D8U403
LinkDB
Position
Unknown
AA seq 148 aa
MARSQPILFEDVFDVVDKDPDGKKFDSVSRFICHSDLYEMDLHIDLNVELFPLQRNDKFS
LVLAWTLNLDATPGSEKYDAFPAISGRRTLMDNYDYVMYGKVFKYKDNNMKVEVYISFGG
LLMKLAGDPAKLEPIEVDSNVYLLLKKL
NT seq 447 nt   +upstreamnt  +downstreamnt
atggcgcggagccaacctatccttttcgaagatgtatttgacgttgttgataaggaccct
gatggcaagaaattcgacagcgtgtcccgcttcatctgccatagcgatctgtacgagatg
gatcttcacattgacttaaacgtggaactgttcccacttcaacgaaacgataagttcagc
ctggttctcgcgtggacgctcaacttggatgcgacgccggggagcgaaaagtacgatgcg
ttcccggccatcagcgggcgccgtactctcatggacaattacgattacgtgatgtacggc
aaagtgttcaagtacaaggacaacaacatgaaggttgaagtgtacatctccttcgggggt
ctgttgatgaagctcgcgggcgaccctgccaagctggaaccgattgaggtggacagcaac
gtttacttgctgctcaaaaaactataa

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