Volvox carteri f. nagariensis: VOLCADRAFT_82651
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Entry
VOLCADRAFT_82651 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_82651
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_82651
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_82651
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VOLCADRAFT_82651
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
VOLCADRAFT_82651
mRNA cycle factors
Common to processing body (P body) and stress granule
VOLCADRAFT_82651
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
VOLCADRAFT_82651
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
VOLCADRAFT_82651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7518
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9617327
NCBI-ProteinID:
XP_002954083
JGI:
82651
UniProt:
D8U664
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAFQGPGGGGQYVPPHLRGMAMGAPPPPPPPGPDRDRGGRGGYGGGGGYGGPRGGGGAYG
GGRGGYGGSFGDRRAGFGQPREGGGPGGSGNGAKRVKYLGGMGFNRPYDDPFKKAEQEKA
EIDALYGAENTGINFDAYEEIPVETSGKDVPQPVHSFEELNLPQCMMDNIKRCKFTKPTP
VQKHSITIGLAGRDLMACAQTGSGKTAAFCFPIIASMLLKGYQPAAGRNSRKALPGALVL
APTRELTSQIYDEARKFTYMTGLRPVVIYGGAPAPNQLRDLERGCDILVATPGRLSDFIE
RGRVGLSSILFLCLDEADRMLDMGFEPQIRRIVEQEDMPPVGQRQTLMFSATFPKEIQRL
AADFLSNYVFLTVGRVGSSTDLIVQHIEYVSSDEKQNTLLDLISTVEGLTLVFVETKRGA
DELERILTRNQLPATSIHGDRSQEQREMALRSFKSGKTPVMVATDVAARGLDIPHVTHVI
NYDLPKDIDDYVHRIGRTGRAGHKGLATAFFTDADAPLARSLVEVLTETNQAVPGWLQNY
AARTPGYGQKSRRGGGRFGGRDFRKDNYGGGGGYGGGDNRGGGGYGGGGYGSGSGGGGYG
GGGYGGGCELLV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcagggacctggtggtggaggacaatatgtgcctccacacctgcggggcatg
gctatgggggctccacctccacctcctcctcctggacctgaccgtgatcgaggcggccgc
ggtggttatggcggtggcggtggctacggtggccctcgcggtggtggtggtgcctatggt
ggtggtcgcggtggctacggtggcagttttggcgatcgccgggccggctttggccagccg
cgcgagggcggcggacctggtgggtcgggcaatggcgcgaaacgcgtcaagtatttaggc
ggtatgggctttaaccgaccttatgacgatcctttcaagaaggcagagcaggagaaggct
gagattgacgcgctttacggcgctgagaacaccggcattaacttcgatgcttatgaggag
attcccgtcgagaccagcggcaaggacgttccgcaaccagtgcacagcttcgaggagctt
aatttgccgcagtgcatgatggacaacataaagcgctgcaagtttaccaagcccacgcct
gtgcagaagcattctattaccattggtttggcaggacgagacttaatggcttgcgcacag
acgggctccggcaagacagctgctttttgctttcccatcatcgcgtctatgctcttgaag
ggttaccagcctgcggctggccgcaacagccggaaagcgctaccaggcgcactggtgttg
gctccaacgcgcgagctgacgtcccagatttacgacgaagcgcgaaagttcacttacatg
accggcctgcgccctgtggtcatatacggtggtgctccagcacccaaccagctgcgtgac
ctggagcgcggctgtgacatccttgtggctacacccggccgcctcagcgacttcatcgag
cgtgggcgtgtcggcctgtcgtcgatcctgtttctctgcttggatgaggcagatcgcatg
ttggatatgggtttcgagccgcagatccggcgtatcgtggagcaggaggacatgccgcct
gttggccagcgtcagacgctgatgttcagcgccactttccctaaggagattcagcgattg
gcagcagatttcctgagcaactatgtcttcctcactgttggccgtgtgggctcctccacc
gacctcatcgtgcagcacatcgagtatgtgtcgtccgatgagaagcagaatactttgctg
gaccttatcagcacggtcgagggtctgacgcttgtattcgtggagacgaagcgcggggcg
gacgagctggagcgcattctgacgcgcaaccaactgccagccacatcgatccacggtgat
cgctcgcaggagcagcgcgagatggcgctgcgcagctttaagagcgggaagacgcccgtc
atggtggctaccgacgtggctgcccgtggtctggatattcctcacgtgacccacgtgatc
aactacgacctgcctaaggacatcgatgactacgtgcaccgcattggacgcacgggacgc
gctggccacaagggtcttgccacggcctttttcactgatgcggatgcgccattggctcgc
tcattggtggaggtgctgacggagacgaaccaggcagtacccggctggctgcagaactac
gctgcccgcacgcctggttacggccaaaagagccgccgcggtggtggtcgttttggcggc
cgcgacttccgcaaggataattacggtggtggcggtggctatggcggaggcgacaaccgc
ggcggcggtggctatggtggcggtggctacggcagcggcagcggcggcggtggttacggt
ggtggcggctacggtggcggctgtgagttattggtgtag
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