KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_82810
Entry
VOLCADRAFT_82810  CDS       T01330                                 
Symbol
spl2
Name
(RefSeq) splicing factor 3a, subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_82810 (spl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_82810 (spl2)
Spliceosome [BR:vcn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    VOLCADRAFT_82810 (spl2)
 Complex B
    VOLCADRAFT_82810 (spl2)
 Complex C
   U2 SnRNP specific factors
    VOLCADRAFT_82810 (spl2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus
Other DBs
NCBI-GeneID: 9624823
NCBI-ProteinID: XP_002954525
JGI: 82810
UniProt: D8U746
LinkDB
Position
Unknown
AA seq 328 aa
MSFISARDHGAKPGSGGPATAQNEAIDRRERLRRLALETIDLSRDPYFMRNHLGQYECRL
CLTLHTNEGNYLAHTQGKRHQQNLAKRAAREAAEKAAVPAPHKRAPIRKTVKIGRPGYRV
TKQYDASTQQRSLLFQVEYPEIEESVKPRHRFMSAYEQRVETADKAFQYLIFAAEPYENI
SFKVPNSEVDRSDGKMFTHWDPDNKIFSLQFYFARQRGGCVCRARPRVCRHPPTLGMHPH
CGLPGSYPPRPRSAGTKPLMPPPFLRPLVIFIVVQAPVGRNSLVIFIRVVQAPLGRVSLV
IFELQIRNLCRKRHLLEILPSHFRALRY
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtccttcatttctgctcgtgatcatggcgcgaagccaggatctggcggacctgcaaca
gctcagaatgaggccattgaccgtcgtgagcgccttcgacggctggcgctcgagaccata
gacctgagcagggatccctacttcatgcgtaatcacttagggcaatatgaatgccgttta
tgcttgacgctccacaccaacgagggaaattatttggctcacacacaaggcaagcggcat
cagcagaaccttgcaaagcgtgcagcacgagaggcggcggaaaaggcagcagtaccggcg
cctcacaaacgcgctcccatccggaaaacagttaaaatcgggcgacctggttaccgcgtc
actaaacagtacgatgccagtacacagcagcgctccctgctttttcaagtcgagtaccct
gagattgaggagagcgtgaagccgcggcatcgcttcatgtcggcgtacgagcagcgtgtg
gagacagctgataaagccttccagtatctgatttttgctgcggagccatacgaaaatatc
tctttcaaagtacccaattcggaagttgaccgctctgatggcaagatgttcactcattgg
gaccccgacaacaagatcttctccctgcagttttattttgcaagacaacgaggtggctgt
gtgtgtcgagccagaccacgagtgtgtcgccacccgccaaccttgggtatgcacccgcat
tgtggcttgcccggatcctaccctcctcgaccacgcagcgcaggcactaagcccttaatg
cccccgcctttcttacgtccgctagtcattttcattgtcgtacaagcacccgtagggaga
aactcgctagtcattttcatccgtgtcgtacaggcacccctagggagagtctcgctagtc
attttcgaactgcaaatccgtaatctctgtcgtaaaaggcacttgttggagattctccct
agtcattttcgcgcgcttcggtattag

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