KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_82881
Entry
VOLCADRAFT_82881  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14290  exportin-1
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03008  Ribosome biogenesis in eukaryotes
vcn03013  Nucleocytoplasmic transport
vcn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VOLCADRAFT_82881
   03008 Ribosome biogenesis in eukaryotes
    VOLCADRAFT_82881
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    VOLCADRAFT_82881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_82881
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_82881
   03016 Transfer RNA biogenesis [BR:vcn03016]
    VOLCADRAFT_82881
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_82881
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     VOLCADRAFT_82881
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    VOLCADRAFT_82881
  Pre-60S particles
    VOLCADRAFT_82881
Transfer RNA biogenesis [BR:vcn03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    VOLCADRAFT_82881
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     VOLCADRAFT_82881
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N
Other DBs
NCBI-GeneID: 9625061
NCBI-ProteinID: XP_002954674
JGI: 82881
UniProt: D8U7K4
LinkDB
Position
Unknown
AA seq 1091 aa
MGDVAQAATLLDFNKPIDVGLLDATVNLSMQSVVGGEQQRAAAEKLLLEFQEHPQAWTRV
DTILEVSQNQPTKYFALQVILESVIRFKWGALPLEQREGIKNYLSNLIIRFSTSEELFRK
ESTFVNKLNILLVQILKHDWPARWKSFIPDLVAASRTSETLCENSMKILKLLSEEVFDFA
RLDLTQAKTKELKQTLTMEFKAIHELCVFVLNNTRKPELIRATLETLSVYLTWVPLGYIF
EGNLLEILLQLFPQAPFRNVALQCLMEVGSLQMATEFNPQFAKFYDYFMRQLVLVVPPTV
NIPDAYEKGTDDQQKFVQNLALFFTSFFKAHIGILEAPETQAQLLAGLDYLVNISYVDNT
EVFKTCLDYWNFFVPDIYTSSCTGADPTGVSFMFAPPATHGVAPATGGRKLLYRPILSKL
RQLMICRMAKPEEVIVVEDENGNIVRETMKDNDVLAQYKSMRETLVYLCHLDYDDTEQQM
LEKLRMQQLAGAKWTWGALNTLCWAIGSIAGSMADEQENRFLVTVIRDLLNLCEVTRGKD
NKAVIASNIMYVVGQYPKFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKICNKC
RRKFVVMQVQEREPFICELLNGLTETIQDLQPHQIHTFYEAVGLMIGAESDPVKRDDYLH
RLMGPPNTTWSQILAQAHANPEVLKQQEVIKSIQNVLQTNVSVCTSLGQPFLVQFNVIFK
DMLQVYRLYSELISQAIAAGGANAARSTFVKYMRSVKKVALKLIETFVDKCDDPQLLAAS
YVPAMMDPLLGDYARSVPDARDAEVLSLMAAIINKLRQLMEPEVPRVFEALFECTLTMIT
RNFEDYPEHRLQFFALLHAIVNSCFNTLFMMSAAQLKLVIDSIVWAFRHTERNVAETGLA
LLHDLLVQFAGSDYATQFHQTYYLHLLNEILAVMTDSFHKPGFKSQARILHHLFTILDAN
VIKAPLWDVAVKGAGAFPTNSAFVRVHVIGLLSTSFPNLTQAQVSACVSGMFEYKDFSAF
KHHLRDFLVQTKQFASQDNAELFAEDVEKQVVEQREARQRVLAAIPGMIPQVSKPASQGL
CTISAYFFYQS
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgggggacgtggcgcaggcggccacgctgctggactttaacaagcccatcgatgtgggc
ttgctggatgcaactgtgaacctgagcatgcagtctgtcgtgggtggcgagcagcagagg
gcggccgcggagaagctcttgctggagtttcaggagcacccgcaggcttggacgcgtgtt
gacaccatcctagaggtgtcacaaaatcagcctaccaagtacttcgcacttcaggttatc
ctcgagagtgtaattcggttcaagtggggagcgcttcctctggagcagcgtgagggcatc
aagaactacctttcgaacttaattattcgattttcaacctccgaggagcttttccggaag
gagagtaccttcgtcaacaagctgaacattctacttgtgcaaattctaaagcatgactgg
ccagcacgttggaagagctttattcctgacctggttgcagcctcacggaccagcgaaacg
ctgtgcgagaacagcatgaagatactcaagctgctgagcgaggaggttttcgactttgca
cgcctggacttaacacaggctaaaaccaaggagctgaagcagactttaacgatggagttt
aaagctattcacgaactgtgtgtgttcgtgctcaacaacacacggaagccagagctcata
cgcgccacgctggaaacccttagcgtgtacttgacttgggtgccgttgggttatatcttt
gagggcaacctgttggagatcctcctacagctctttccgcaggcacccttccgcaacgtc
gccttgcagtgcctgatggaggtaggctctcttcaaatggcgacggaattcaatccgcag
tttgcgaaattctatgactatttcatgcggcaattggtcttggtagtgccaccgactgtc
aatatcccggatgcgtacgagaaaggcacagacgaccagcagaaattcgtgcaaaacctg
gcgcttttcttcacaagctttttcaaggcgcatatcggcattctggaagctccggagaca
caggcgcagctcctggcaggcttggattacctggttaacatctcctacgtggataacact
gaggtcttcaaaacgtgtctcgactactggaactttttcgtccccgacatctatacctcc
tcgtgtacgggggcagacccaaccggggtatcgttcatgttcgcgcctcctgccacgcac
ggcgtggcacctgccaccggtggtcgcaaattgctataccggccgatcctatcgaagctg
cgacagttaatgatttgcagaatggcaaaaccggaggaggttatcgttgtggaagacgag
aacggtaacattgtgcgggaaacgatgaaggacaacgacgtgttagcgcagtacaagtcg
atgcgcgagacgcttgtatacttgtgccaccttgactatgacgacacggagcagcagatg
ctggagaagctgcggatgcagcagctcgcaggtgccaagtggacgtggggtgctttgaat
acactttgctgggccattggctctatcgcagggtcaatggcggatgaacaggagaaccgc
ttcctggtcaccgtcattagggatctcttgaacctctgtgaggtgacgcgtgggaaggac
aacaaggcagttattgcgtctaacatcatgtacgtggtgggacaatatcccaagttcctg
cgggcgcattggaaattcctgaaaacagtggtcaacaagctgttcgagttcatgcacgag
acgcaccccggagtgcaggacatggcttgcgacacctttttaaagatctgcaacaaatgc
agacgcaaatttgtggtaatgcaggtccaggagcgcgagccgttcatttgcgagctgctt
aatgggctaacggagaccattcaggacctgcagcctcaccagatccacactttttacgag
gctgtgggtttgatgattggtgcggaatctgaccccgtcaagcgagatgattacctgcac
cggctaatggggcctccgaatacaacgtggagccaaatcctggcccaggcgcatgcgaat
ccggaagtgttgaagcagcaagaggtgatcaagtccatacagaacgtgttgcagacgaat
gtttccgtctgcacttcgctcggccagccattcctcgtgcagttcaacgtcattttcaaa
gatatgctgcaggtgtacaggctgtacagcgagcttatcagccaggcgatcgctgccggg
ggtgcaaatgcagcaaggagcaccttcgtgaagtacatgcgtagcgtgaagaaggttgcc
ctgaagcttattgaaacgttcgtggataaatgcgacgacccgcagctccttgcagcctcg
tacgtgcctgccatgatggacccgttattgggtgactacgcgcgaagtgtgccggatgcc
cgggatgccgaggtgctaagcctcatggcagctatcattaacaaactgcgacaactgatg
gagccagaggtcccgcgggtcttcgaggcactgtttgagtgcacactcacgatgataacc
cgtaactttgaggattaccccgagcaccgtctgcagtttttcgcgcttctacacgctatc
gtgaattcgtgtttcaatacgctcttcatgatgagcgcagcgcagctgaagcttgtcatc
gactcgatcgtgtgggccttccggcacacagagcgcaacgttgcggaaacgggcctggcg
ctattgcatgacctgctggtccagtttgccggctctgactacgcgacccaattccaccag
acctattacctgcatctgttgaatgaaatcctggccgtcatgaccgattctttccacaag
ccgggtttcaagagtcaggcacgtatcttgcatcacctcttcaccattttggatgcaaac
gtcattaaagcacctctatgggacgtcgctgtcaaaggcgctggagccttcccgacgaac
tcagcattcgtccgggttcatgtcattgggctcctttctacctccttcccgaacctcacg
caggctcaggtcagcgcctgtgtttcgggcatgttcgagtacaaagacttctctgccttc
aaacatcatctacgggacttccttgtacagacgaagcagtttgccagccaggataatgcg
gagcttttcgcggaagatgtcgagaagcaggtcgtcgagcaacgcgaagcccggcagcgt
gtgctagcagccattcccggcatgattccacaggtgagcaaaccagcatcgcaaggccta
tgcactatttctgcctattttttttaccaaagctga

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