Volvox carteri f. nagariensis: VOLCADRAFT_82881
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Entry
VOLCADRAFT_82881 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03008
Ribosome biogenesis in eukaryotes
vcn03013
Nucleocytoplasmic transport
vcn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_82881
03008 Ribosome biogenesis in eukaryotes
VOLCADRAFT_82881
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VOLCADRAFT_82881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_82881
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_82881
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_82881
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_82881
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
VOLCADRAFT_82881
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
VOLCADRAFT_82881
Pre-60S particles
VOLCADRAFT_82881
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
VOLCADRAFT_82881
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
VOLCADRAFT_82881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
9625061
NCBI-ProteinID:
XP_002954674
JGI:
82881
UniProt:
D8U7K4
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MGDVAQAATLLDFNKPIDVGLLDATVNLSMQSVVGGEQQRAAAEKLLLEFQEHPQAWTRV
DTILEVSQNQPTKYFALQVILESVIRFKWGALPLEQREGIKNYLSNLIIRFSTSEELFRK
ESTFVNKLNILLVQILKHDWPARWKSFIPDLVAASRTSETLCENSMKILKLLSEEVFDFA
RLDLTQAKTKELKQTLTMEFKAIHELCVFVLNNTRKPELIRATLETLSVYLTWVPLGYIF
EGNLLEILLQLFPQAPFRNVALQCLMEVGSLQMATEFNPQFAKFYDYFMRQLVLVVPPTV
NIPDAYEKGTDDQQKFVQNLALFFTSFFKAHIGILEAPETQAQLLAGLDYLVNISYVDNT
EVFKTCLDYWNFFVPDIYTSSCTGADPTGVSFMFAPPATHGVAPATGGRKLLYRPILSKL
RQLMICRMAKPEEVIVVEDENGNIVRETMKDNDVLAQYKSMRETLVYLCHLDYDDTEQQM
LEKLRMQQLAGAKWTWGALNTLCWAIGSIAGSMADEQENRFLVTVIRDLLNLCEVTRGKD
NKAVIASNIMYVVGQYPKFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKICNKC
RRKFVVMQVQEREPFICELLNGLTETIQDLQPHQIHTFYEAVGLMIGAESDPVKRDDYLH
RLMGPPNTTWSQILAQAHANPEVLKQQEVIKSIQNVLQTNVSVCTSLGQPFLVQFNVIFK
DMLQVYRLYSELISQAIAAGGANAARSTFVKYMRSVKKVALKLIETFVDKCDDPQLLAAS
YVPAMMDPLLGDYARSVPDARDAEVLSLMAAIINKLRQLMEPEVPRVFEALFECTLTMIT
RNFEDYPEHRLQFFALLHAIVNSCFNTLFMMSAAQLKLVIDSIVWAFRHTERNVAETGLA
LLHDLLVQFAGSDYATQFHQTYYLHLLNEILAVMTDSFHKPGFKSQARILHHLFTILDAN
VIKAPLWDVAVKGAGAFPTNSAFVRVHVIGLLSTSFPNLTQAQVSACVSGMFEYKDFSAF
KHHLRDFLVQTKQFASQDNAELFAEDVEKQVVEQREARQRVLAAIPGMIPQVSKPASQGL
CTISAYFFYQS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtggcgcaggcggccacgctgctggactttaacaagcccatcgatgtgggc
ttgctggatgcaactgtgaacctgagcatgcagtctgtcgtgggtggcgagcagcagagg
gcggccgcggagaagctcttgctggagtttcaggagcacccgcaggcttggacgcgtgtt
gacaccatcctagaggtgtcacaaaatcagcctaccaagtacttcgcacttcaggttatc
ctcgagagtgtaattcggttcaagtggggagcgcttcctctggagcagcgtgagggcatc
aagaactacctttcgaacttaattattcgattttcaacctccgaggagcttttccggaag
gagagtaccttcgtcaacaagctgaacattctacttgtgcaaattctaaagcatgactgg
ccagcacgttggaagagctttattcctgacctggttgcagcctcacggaccagcgaaacg
ctgtgcgagaacagcatgaagatactcaagctgctgagcgaggaggttttcgactttgca
cgcctggacttaacacaggctaaaaccaaggagctgaagcagactttaacgatggagttt
aaagctattcacgaactgtgtgtgttcgtgctcaacaacacacggaagccagagctcata
cgcgccacgctggaaacccttagcgtgtacttgacttgggtgccgttgggttatatcttt
gagggcaacctgttggagatcctcctacagctctttccgcaggcacccttccgcaacgtc
gccttgcagtgcctgatggaggtaggctctcttcaaatggcgacggaattcaatccgcag
tttgcgaaattctatgactatttcatgcggcaattggtcttggtagtgccaccgactgtc
aatatcccggatgcgtacgagaaaggcacagacgaccagcagaaattcgtgcaaaacctg
gcgcttttcttcacaagctttttcaaggcgcatatcggcattctggaagctccggagaca
caggcgcagctcctggcaggcttggattacctggttaacatctcctacgtggataacact
gaggtcttcaaaacgtgtctcgactactggaactttttcgtccccgacatctatacctcc
tcgtgtacgggggcagacccaaccggggtatcgttcatgttcgcgcctcctgccacgcac
ggcgtggcacctgccaccggtggtcgcaaattgctataccggccgatcctatcgaagctg
cgacagttaatgatttgcagaatggcaaaaccggaggaggttatcgttgtggaagacgag
aacggtaacattgtgcgggaaacgatgaaggacaacgacgtgttagcgcagtacaagtcg
atgcgcgagacgcttgtatacttgtgccaccttgactatgacgacacggagcagcagatg
ctggagaagctgcggatgcagcagctcgcaggtgccaagtggacgtggggtgctttgaat
acactttgctgggccattggctctatcgcagggtcaatggcggatgaacaggagaaccgc
ttcctggtcaccgtcattagggatctcttgaacctctgtgaggtgacgcgtgggaaggac
aacaaggcagttattgcgtctaacatcatgtacgtggtgggacaatatcccaagttcctg
cgggcgcattggaaattcctgaaaacagtggtcaacaagctgttcgagttcatgcacgag
acgcaccccggagtgcaggacatggcttgcgacacctttttaaagatctgcaacaaatgc
agacgcaaatttgtggtaatgcaggtccaggagcgcgagccgttcatttgcgagctgctt
aatgggctaacggagaccattcaggacctgcagcctcaccagatccacactttttacgag
gctgtgggtttgatgattggtgcggaatctgaccccgtcaagcgagatgattacctgcac
cggctaatggggcctccgaatacaacgtggagccaaatcctggcccaggcgcatgcgaat
ccggaagtgttgaagcagcaagaggtgatcaagtccatacagaacgtgttgcagacgaat
gtttccgtctgcacttcgctcggccagccattcctcgtgcagttcaacgtcattttcaaa
gatatgctgcaggtgtacaggctgtacagcgagcttatcagccaggcgatcgctgccggg
ggtgcaaatgcagcaaggagcaccttcgtgaagtacatgcgtagcgtgaagaaggttgcc
ctgaagcttattgaaacgttcgtggataaatgcgacgacccgcagctccttgcagcctcg
tacgtgcctgccatgatggacccgttattgggtgactacgcgcgaagtgtgccggatgcc
cgggatgccgaggtgctaagcctcatggcagctatcattaacaaactgcgacaactgatg
gagccagaggtcccgcgggtcttcgaggcactgtttgagtgcacactcacgatgataacc
cgtaactttgaggattaccccgagcaccgtctgcagtttttcgcgcttctacacgctatc
gtgaattcgtgtttcaatacgctcttcatgatgagcgcagcgcagctgaagcttgtcatc
gactcgatcgtgtgggccttccggcacacagagcgcaacgttgcggaaacgggcctggcg
ctattgcatgacctgctggtccagtttgccggctctgactacgcgacccaattccaccag
acctattacctgcatctgttgaatgaaatcctggccgtcatgaccgattctttccacaag
ccgggtttcaagagtcaggcacgtatcttgcatcacctcttcaccattttggatgcaaac
gtcattaaagcacctctatgggacgtcgctgtcaaaggcgctggagccttcccgacgaac
tcagcattcgtccgggttcatgtcattgggctcctttctacctccttcccgaacctcacg
caggctcaggtcagcgcctgtgtttcgggcatgttcgagtacaaagacttctctgccttc
aaacatcatctacgggacttccttgtacagacgaagcagtttgccagccaggataatgcg
gagcttttcgcggaagatgtcgagaagcaggtcgtcgagcaacgcgaagcccggcagcgt
gtgctagcagccattcccggcatgattccacaggtgagcaaaccagcatcgcaaggccta
tgcactatttctgcctattttttttaccaaagctga
DBGET
integrated database retrieval system