Volvox carteri f. nagariensis: VOLCADRAFT_82970
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Entry
VOLCADRAFT_82970 CDS
T01330
Symbol
spl8
Name
(RefSeq) splicing factor U2AF, large subunit
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_82970 (spl8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_82970 (spl8)
Spliceosome [BR:
vcn03041
]
Complex A
U2 snRNP components
U2 related factors
VOLCADRAFT_82970 (spl8)
Complex B
VOLCADRAFT_82970 (spl8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
9621482
NCBI-ProteinID:
XP_002954808
JGI:
82970
UniProt:
D8U7V9
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MRDHRDNRNNYRPEPEQGYGYPPLREDYTGHPGPGRDRRDRDREYDRERERGDRERDRRR
DRSRDRRRSRSRSGSPPVKQGRRRPTLFDVLPPGMAPGAPPPPAVLPGAQPNLAAAAAFA
APPPSLAPLMVGVGSHGGLGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGGGGGFGA
AAGPPAVSQQATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGGFPFHSTSI
TSPQSIRSSILREFIEETSNAMALDGIMFEGVSVRVRRPNDYNPAAAASLGPSTPNPNLN
LAAIGLSNAAGGGADQADRIFVGGLPYYLTEEQCRELLGSFGPIKSFDLVKDRETGNSKG
YGFVVYQDSAVTDIACAGLNGLRMGDRTLTVRRATEGAPSASGAGAAASTALGPPGLVPA
ALANLGVGVGVGVGLNPLVSAEEIVDNTEYEDILADMKDEASRHGLCNNVLIPRPTAENP
NPPGMCKVIMEFNDVNSAVKARNAMHGRRFAGRVVNATYLTEEAYFSGRYDG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagagaccaccgggataaccgcaataactacaggcctgagccggagcaaggatatggt
tatccgccgctgagggaagattatacaggacatccaggacccggcagagacagaagggac
agggaccgggaatatgatcgcgagcgtgaacgtggagaccgcgagagggaccgccgccgt
gatcgcagccgcgaccggcgccggtcccgaagccgctcgggctctcccccagtcaagcag
ggtcgccggaggcccacactctttgacgtgcttcccccaggcatggcccccggcgcacca
cctcccccggcagttttgcctggagcccagcccaaccttgcagcggcagcggccttcgca
gcgccgcccccctctttagccccccttatggtgggagttggttcccatggcggcctgggt
ggtggtggtggcggtggtggtggcggtggcggaggcttcggtggtggtggaggtttcggt
ggtggcggcggcggaggcggtggtggtggtggcggaggtggaggcggtggttttggtgcc
gctgcgggtccacccgctgtgagtcagcaggccacccgccacgcccggcgcatctacgtg
ggcggactgccccccactgccacggagcagtccattagctccttctttagccatgcactg
gcggccatcggcggcaacacggcagggccaggtggctttccctttcactccacatccatt
acttcgcctcaatcgatccgttcttcaatacttcgagagttcatcgaggagacttccaat
gccatggccctggacggcatcatgttcgagggcgtgtcggtgcgtgtgcggcggcccaac
gactacaaccccgccgcagctgcctccctggggccctccacccccaaccccaacctcaac
ctggctgctatcggactatccaatgcagcaggcggaggcgccgaccaggcggatcgcatc
ttcgtgggcggcttgccgtactacctgacggaggagcagtgtcgtgagctgttgggatcc
ttcggccccatcaagtcgtttgacctggtcaaagacagggaaacggggaacagcaagggg
tacggcttcgttgtgtatcaggactctgccgtcaccgacatcgcatgcgcgggtcttaac
ggtctccgaatgggcgaccggactctcacagtgcggcgggctacggagggcgctccctca
gcttccggtgccggtgccgccgcgagcaccgccctggggcccccgggcctggtgcccgcc
gccctggccaacctgggtgtcggtgtgggggtaggtgtggggctcaacccgctggtttcg
gcggaggagatcgtggacaacaccgagtacgaggacatcctggcggatatgaaggacgag
gcctcgcgccacgggctgtgcaacaatgtgctcattccgagaccaactgcggaaaacccc
aacccgccgggcatgtgcaaggttataatggagttcaacgacgtcaactccgcagtcaag
gcccgcaacgccatgcacggacggcgattcgcgggacgtgtcgtcaacgccacctacctc
acggaggaggcctatttctcaggccggtacgacgggtga
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