Volvox carteri f. nagariensis: VOLCADRAFT_83541
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Entry
VOLCADRAFT_83541 CDS
T01330
Symbol
urod2
Name
(RefSeq) uroporphyrinogen decarboxylase chloroplast precursor
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00860
Porphyrin metabolism
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
vcn01240
Biosynthesis of cofactors
Module
vcn_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VOLCADRAFT_83541 (urod2)
Enzymes [BR:
vcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
VOLCADRAFT_83541 (urod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
URO-D
Motif
Other DBs
NCBI-GeneID:
9618994
NCBI-ProteinID:
XP_002956240
JGI:
83541
UniProt:
D8UC43
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MTGKTILRSDGICRSAVLRHLAFKPIAVGMSRATAVVVKAQPAAGGMQDPLMVRAARGEK
VERAPCWMMRQAGRYQKSYRELAKKHPSFRERSETTELIVEISLQPWNSFRPDGVILFSD
ILTPLPGIGVNFDIDDNKGPIIDTPIRSLEQVKQLHEMDFGKVDFVGRALTQLRAEVNNQ
AAVLGFVGSPWTLATYLIEGGSTSLYKTIKTMCFSAPDVLDALLTKLADAMAAYIKYQIR
AGAQCVQIFDSWGGQLPPREWEKWSGPYLKRIIASVKAEYPTVPLTLYANGSGGLLERLA
ATGADVVGVDWTTDMSDARRRIDSNVSVQGNVDPAILFASKDAIEDAVRDCLRKAGGNRH
ILNLGHGVLVGTPEEGVAHMFDLSKRLTYADVAQI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaaaacgattttgcgttccgatggcatttgccgcagcgccgttcttaggcat
cttgcgttcaagcctatcgccgtaggcatgtcgcgagcgacagcggtagttgttaaagca
cagccagctgcaggcggcatgcaagatccgctcatggttcgcgctgcgcgtggcgaaaaa
gttgagcgtgctccctgctggatgatgcggcaagctggccgctatcaaaaatcgtatcgg
gagctggcgaagaaacatccgtcttttcgtgagcgttctgagacaactgagctgatcgtg
gagatcagcttacagccctggaattccttcaggccagatggcgtcattttgtttagcgac
attcttacacctcttccggggatcggtgtcaactttgacatcgacgataacaaggggccg
attattgatacccccatccgtagcctggagcaagtgaagcagctgcacgaaatggatttc
ggcaaggtggacttcgtgggcagggcattgacccagctccgggcagaggtgaacaaccaa
gcggcggtgctgggcttcgtgggctccccgtggacgttagccacgtacctgattgagggt
ggttccacgtcgctatataagaccattaagacgatgtgcttttctgcgccagacgtcctg
gacgccttgctgaccaagctggcggatgctatggctgcgtacatcaagtaccagatccgt
gcgggcgcccagtgcgtgcagatttttgactcgtggggtgggcagctcccaccccgggag
tgggagaagtggagcggaccgtatctgaagcgcatcattgcatcggtgaaagctgagtat
cccacagtgccgctgacgctctatgcgaacggttcgggcggcctcttggaacgcttggcg
gcaacgggcgcggacgtggttggcgttgactggacgacggacatgtcggacgcgcggcgt
cggatagatagcaatgtatcggtgcagggcaacgtggaccccgctatcctctttgcatcg
aaggatgctattgaggatgccgtgcgggattgcctgcgcaaggcggggggcaatcgccac
atcctcaacctgggccacggagtcttggtgggcacgcccgaggagggagtcgcgcacatg
ttcgatctgtcgaaacgcttgacatacgccgacgttgctcagatctga
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