Volvox carteri f. nagariensis: VOLCADRAFT_84109
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Entry
VOLCADRAFT_84109 CDS
T01330
Symbol
rfc2
Name
(RefSeq) DNA replication factor C complex subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03030
DNA replication
vcn03410
Base excision repair
vcn03420
Nucleotide excision repair
vcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VOLCADRAFT_84109 (rfc2)
03410 Base excision repair
VOLCADRAFT_84109 (rfc2)
03420 Nucleotide excision repair
VOLCADRAFT_84109 (rfc2)
03430 Mismatch repair
VOLCADRAFT_84109 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_84109 (rfc2)
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_84109 (rfc2)
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_84109 (rfc2)
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VOLCADRAFT_84109 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
VOLCADRAFT_84109 (rfc2)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VOLCADRAFT_84109 (rfc2)
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VOLCADRAFT_84109 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
VOLCADRAFT_84109 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
RCF1-5-like_lid
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
AAA_11
AAA_assoc_2
nSTAND3
RuvB_N
AAA_24
AAA_19
ABC_tran
TniB
AAA_28
AAA_5
DNAX_ATPase_lid
AAA_25
AAA_3
MeaB
AAA_30
AAA_7
IstB_IS21
bpMoxR
KTI12
SRP54
AAA_18
NTPase_1
SRPRB
Motif
Other DBs
NCBI-GeneID:
9626882
NCBI-ProteinID:
XP_002957431
JGI:
84109
UniProt:
D8UFN0
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MDLDPKPPEEPNTRGGFELPWLEKYRPQYIHEIVGNMEAVARLQVIAEEGNMPNVILAGP
PGTGKTTSILCLAHQLLGPTYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI
VILDEADSMTAGAQQALRRTMEIYSNTTRFALACNQSSKIIEPIQSRCAIVRYSRISDVD
ILSRLRLVCEKEGVTYNDEGMEALIFTADGDMRQALNNLQATHSGFGFISQENVFKVCDQ
PHPKLVMSIIENCSKADLDAAYAGLKGLVDLGYSSHDIITTVFRVVRNADIPEFLKLEYL
REVGFCHMRIAEGVNSRLQLSGMLAKLCSKTLAVA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacttggatcctaaacctcccgaagagcctaacacgcggggaggctttgagttgcca
tggttggagaagtaccgtccgcagtacatccacgaaatagttggcaacatggaagctgtt
gcacgccttcaagttattgcggaggagggtaacatgcccaacgtcattctcgccgggccc
cctgggacgggtaagacgacaagcattctatgcctcgcacatcagctgctggggcccacc
tacaaggaagccgtgttggagctgaatgcctcggatgacagaggcattgacgtggtacgg
aacaagattaagatgttcgctcagaagaaggtcacgttgcctccgggccgccacaagatt
gtcattctggatgaggcagatagcatgacggcgggggctcagcaggcgttgcgccggacg
atggaaatctacagcaataccacgcggtttgcactcgcttgcaaccagtcgtccaagatc
attgagccaattcagtcgcgctgcgctatcgttcgctatagccgtatatctgatgtcgac
attctctcccgtttgcgcttggtgtgcgagaaggagggggtgacctacaacgacgagggc
atggaggcgctgatttttaccgcagacggtgacatgcggcaggctctcaacaatctgcag
gcgacgcatagcggcttcggcttcatcagccaggagaatgtcttcaaagtttgcgaccag
ccgcaccccaagctggtgatgtctattattgaaaactgcagcaaagcggacctagatgcg
gcatacgcgggtcttaagggattggtggacctgggttacagctctcatgacattatcacc
accgtcttcagagtggttcgcaacgcggacattcctgaatttctgaagctagaatacctc
agggaggtcggcttctgccatatgcgcattgccgagggcgtcaactctcggctacagctc
agcgggatgcttgccaagttgtgttcgaagacgttagctgtggcataa
DBGET
integrated database retrieval system
