Volvox carteri f. nagariensis: VOLCADRAFT_84373
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Entry
VOLCADRAFT_84373 CDS
T01330
Symbol
dpd1
Name
(RefSeq) DAP decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00300
Lysine biosynthesis
vcn00470
D-Amino acid metabolism
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
vcn01230
Biosynthesis of amino acids
Module
vcn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VOLCADRAFT_84373 (dpd1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VOLCADRAFT_84373 (dpd1)
Enzymes [BR:
vcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VOLCADRAFT_84373 (dpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
9623249
NCBI-ProteinID:
XP_002958152
JGI:
84373
UniProt:
D8UHN1
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MQTISGRSVAGRTSRAAIASQRVRKACVVRDAAVVEEKPVGTAWEFTQPAGKGLGWYTGA
EDGYMYVDQLRVEDIRRQVPESPFYLYSKNRIMHNYQAYKKALEGLSSLPCYAVKANNNL
IIMKELAAAGAGAVLVSGNELKMAMAAGFDPSRTIFNGNGKLPWELELAAEKGVLINIDS
EFDLQNIAAAARKTGKKVKVLLRINPDVDPQVHPYVSTGLAGSKFGIRNSHIGWFLEAIR
AEPLLELVGVHSHLGSTITKVNIFRDAAVIMCEFVKMIRSEGFNLQYLNIGGGLGIDYSH
QGQVLPTPTDLIDTVRDIVKELGLTLVIEPGRSMGRRRVKTNGNKHFIVIDGSMATLIRP
SLYGAYQHIELTKPSNAPMETFDVVGPICESGDYLGKDRQLPTPQPGDGLVVHDAGAYCM
SMASNYNLKMRPAEYLVEEGGKLRKIRHEETLEHHLSVFDGL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcagactatcagcggtcgctccgtggcggggcgcactagccgcgctgcgattgcttcg
cagcgggttcgcaaggcgtgtgtggttcgcgacgctgctgtggtcgaggagaagcccgtt
ggcactgcatgggaattcacccagccagctggaaaaggcctgggctggtacactggcgct
gaggatggctacatgtatgtagaccagctgcgggtggaggacatccgtcgtcaggtgccc
gagagccccttctacctctactcgaagaaccgtatcatgcacaactaccaggcctacaag
aaggccctggaaggcctcagctcgctgccttgctacgcggttaaggccaacaacaacctc
atcatcatgaaggagctcgcggcagctggtgcgggtgcagtgctggtcagcggaaacgag
ctcaaaatggcgatggcagcgggattcgatcccagccgcaccattttcaacggcaacggc
aagctaccctgggagctggagctcgctgcggagaagggcgtgctgatcaacatcgattcc
gagtttgacctgcagaacattgcagccgccgctcgcaagacgggcaagaaggtcaaggtg
ctgttgcgcatcaacccggacgtcgatccgcaggtgcacccgtatgtgtctaccggcctg
gctggatccaaatttggaatccgcaacagccatattgggtggttcctggaagccatccgc
gccgagcccctcctggagctggtgggggtgcacagccacctggggtccaccattaccaag
gtcaatatcttccgcgacgccgcggtgatcatgtgcgagttcgtcaagatgattcggtcc
gagggcttcaacctgcagtacctcaacatcggggggggcctgggtatcgactacagccac
caggggcaggtgctccccacccccaccgacctcatcgacacggttcgtgacatcgtcaag
gagctgggccttacgctggtgatcgagcccggcagatccatggggcgacgtcgtgtgaag
accaacggcaacaagcacttcatcgtcattgacggctccatggccacgttgatccgcccc
tcgctgtacggcgcataccagcacatcgagctcaccaagcccagcaatgcgcccatggag
acgttcgacgtggtgggccccatctgcgagagcggggactacctaggcaaggaccgccag
ctacctacaccacagcccggtgacggtcttgtggttcacgacgcgggcgcctactgcatg
tccatggcctccaactacaacctcaagatgcggcccgcggagtacttggtggaggagggc
ggcaagctcaggaagatccgccacgaggagacgctggagcaccacttgagcgtctttgac
ggactgtga
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