Volvox carteri f. nagariensis: VOLCADRAFT_86130
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Entry
VOLCADRAFT_86130 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K19720
collagen type III alpha
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
VOLCADRAFT_86130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vcn00536
]
VOLCADRAFT_86130
Glycosaminoglycan binding proteins [BR:
vcn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
VOLCADRAFT_86130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
9625517
NCBI-ProteinID:
XP_002945804
JGI:
86130
UniProt:
D8THY6
LinkDB
All DBs
Position
Unknown
AA seq
2493 aa
AA seq
DB search
MSGLSSLSGAPPPGVRRSVPDSGGAKSPFDDNNDEPKAGKSTFKDPFSDDPPLSTRGGRA
GPSTSSAIKPSASNPAFKWEDDDSPPRGKSSTAGKALFGDDDDDFLSSLAPDSVAKKADD
PLSRSTATGVRSSMTKPAGKSPDDIWGIMKAKEEPPPFPADLGLDLFGATASKPASGPRA
GRRAGASVQQSMTDLPPEISREPTPEPLRPAMSPEPSSTVRPGAEPSGGFDRSRSTPRGS
YLGEELSDVPTRSAGSAPGSTRSRGNETGMGAEASSTSPPSRATRPSGGGGAVGGAMELD
GDELPGLGSPAMLSKNPSTASVHAAAAAAPAGGRRTGPATAAAKPRKEEDSWEMDDNLLP
DDSNTPPPAALPPKSPTMGGSSGYTPSAAEAPGRSRLQNTTFLGQKKEEEPMASDEPPET
GGYTPSFGGVRRSLGGPGLGGGGLGSSVDVSAGGGGLMGSALNPGGPGAPRPRRQLGAGA
DTSPLASLSGGGLAGGGAKPGTPPAKKTKEDEERERTQKAMAEAMARRQQLLASGPIRMP
GQDRPAPVSPTGFGSTAATDSGVVTTPLSPSPIRAVPEGKPGMGGFGKKVPGLGFSSDSS
DDELLQPDKATSPPLHMMAGRKAGSAGHQPSRATTAGPLTRETFDSRVASSVPEMGAAAA
AAALGAVPGPGPGSILQSSAPAPPLLPEASYPHSVGSQPSAPNVGPVPSQTPSQLPQPER
SGTSSASQPSAAGAAGLLPGVAAVSPQASQMQGLSPPPPVQQQANPPPGVTAVQQQQQPG
SPTGVAPVASQGNFPPGMGPPYQQQQPGLPPGVTVMQPQQQQPSLPPGVTQMQISQPQHP
GLPPGVTQMQQQPGLPPSVTVIHPQQQQQQPGLPPGVTALQPQQQQQQPGLPPGVTALQP
QQQQQRGLPPGVADWQQQQQQQNLPPGVMSMQQNYQRSLPPGVTDLQQQQQQSNVAPGVM
PIQQRNVAPGGRYGSPQHVQQGGGMSTAFAVSPDSVAAVTISRAMSAQQQAQQPQPHNVS
ALAVPSSASQSPGEPTLASRLSLEPLKDALTKSLQDELEKVSKQVAEVKASYDKQLADVR
AEYERQLAEARTVHQKQLLDVRALAERQVEEARAHHRKQMEDVHVHNERKLDEVRRRMER
QAEEARAAQERVLVEARAQRDKVLEDARLAQTKALEDARGQQQRALEDTRALHERVLADT
QAVHVKQVVELKNLYESELRRAAHDVGRAVDDTRRVAEEARRQEAEARRAKEEAVALRDR
ILGLEAELRARDGALREAETRFVQLDTRSKTELAETQANAIKEAALMKLEMEDAKAALSR
VRQQYEEAAMAHAAEVTRYRAELDAQRVMAEEELQRARLATAEQIAAAEARGRRAGMLDK
EIAEATIRQQMAAIAEEKEVVARHRLSAELLAQLTEKVRSVAVSSLEREERALSALERDV
ADREGRLAAREKLLGEREGRVAQREREVDALRADLQNLMVTLETSAVHDREDLKREQLRL
TREAARVEAATSSLQAEREDLRVQIAMERRLLEEAREARRREREDLLTEVTAERRRLATE
YADTQRQLDAARTELLAVRSRLVDLESRCSGAAAQVAEEEKRLEALRIEASQTRQGLEAE
TSQIRKALEAEVTQTRQALQAEAKQTRELLQDEVAQARESVFAEVKQTRESLKAEVARTR
AELQAEANETGEALRGEKEVVMLKRANVDIEARELVEYAAKLRAQSEELAARAAEAELRD
TQIKTTLESLTRNQEELLAAQKQVEEQRVAQEALKKALDKDRKALMEERQGLAEERLAAS
RSADEARTEQIRLMEAVRTYVQQGIPIPFAMDGTSGRLKPVPPPMRHSSPSPDRHRSGKR
RGPRPTGRSRNALKYLLDRLGMDAAITAAESPPGHLGGAGGASGSSYVRAQHEFLEKMRL
SATTGPASVGPKLNSMTPTAAARATTVTSPIPAGLNPALLPPGLPAAHARSVVVTPVKHV
STVPVGVDDGGGILTARGQLESEMPASAAPLPSLSVGLADSPGLAAAAVDHDTLSQLLFR
HGVGAADEQAFGGGGGTAVIQQLLDTIQMALKKSSRVSASKASDASALETAGHAHRTLSA
AVVQPESRSRGGAANVSRAVNSQRRHGGGSRHGNAAAGGEGAAGDGSGAATLPRVLLNTP
GMGASLGLESEVPLRDPMQPEGQVSSIASLEPLSASNGSFADVPPPRVEVDSPDLSGPLG
RGLDLLAEQLSSSTVFDSAAAATPANTLMSRTAVGASLGSEDYAFGLLGHGRNATAAARQ
AQLGELAAMSEMLAARLDALGLGQMGGGGMTDSQGSGGFRGVRGGGVEGTSLMNSANLSP
RVDMPGGGGMTLRQGTAARLSPLAVASPTTRTMQWAGAAEGLARSLTGAGLGGAAAAGSM
ATTPRPGLGIVGGGLGSTTRSAADTPLLGSTNADALAGLTMPPQDDFDMNEEDADGEAAR
EAGGGGGGEGTLSTIASVDTISDDDEAVTSMLP
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggattgtcaagtttgtcaggagcgccacccccaggagtgcggcgctccgttcca
gactctggaggtgcgaagtcccctttcgatgataacaatgacgaaccgaaggctggcaag
tccaccttcaaggacccattttccgatgacccaccgctcagcactcgaggaggacgggct
ggccccagcaccagctctgctataaaaccatccgccagcaaccccgctttcaagtgggag
gacgacgactctccgccacgcggcaagtccagcacagcagggaaagccctgtttggcgac
gacgacgacgacttcctgtcctccctagccccggattccgtagccaaaaaggcggatgac
ccgctctcgcgctcgactgcaactggcgtgcgctcatcaatgacaaagcccgcaggcaag
tcacccgatgacatctggggcataatgaaggcgaaggaggagccgcccccttttccagcg
gacctcggactggacctgtttggggctaccgccagcaagccggcaagcggtccccgcgcc
gggcggcgtgcgggcgcgagtgtgcagcagtccatgactgacctgcccccggagatttcc
agggagcccacgccggagccattgcggccggcgatgtcgccggagccaagcagcaccgta
cgcccgggcgccgagccgagcggtgggtttgatcggagccgcagcaccccacgaggatct
tacctcggcgaggagctcagcgatgtgccaacacgcagtgcaggttcagcccctgggtcg
acccgatcgcgtgggaatgagaccggcatgggggctgaggcatccagcacctcacccccc
agccgtgccacacgacctagcggtggtggcggcgctgtgggtggcgcgatggagctggac
ggagatgaattgcctggcctagggtcgcccgccatgttaagcaaaaatcccagcaccgcc
tcagtgcacgcggcggcagctgcggcgccggctggaggccgtcggactggcccggctacc
gcagcggcaaagccgcgaaaggaagaagatagctgggagatggacgacaacctgctgcca
gacgacagcaacactccgccgcccgctgcgctgccaccaaagtcgcccacgatgggtggc
agctcgggctacacgcccagcgcggcggaggcgcctgggaggtcgcggctgcagaatacc
acgtttttgggccagaagaaagaggaggagccgatggccagcgacgagcctccagaaacc
ggcggctacacgccatcttttggaggtgtgagacgctcgctcggaggccccgggcttggt
ggcgggggcctgggctccagtgtagacgtgagcgctggtggtggcgggctcatgggctca
gcactgaatccaggaggccccggtgccccgcgtcctcggcggcagctgggcgcgggcgcg
gacacctctccattggcttcactgtccggcggcggattggccggcggcggcgccaagcca
ggcactccgccagcgaagaagaccaaagaggatgaggagcgtgagcgtactcagaaggct
atggcggaggccatggctcgccgccagcagctacttgcgtcaggtcccatccgcatgccg
gggcaggaccgaccagcccccgtcagccccacaggctttggctccaccgcggccacagat
tccggggtggttactacgccgctcagcccctcccccatacgggctgtaccagaaggaaag
cctggcatgggcggcttcggcaagaaggtgcctggcttggggttctcatcggactcgtca
gatgatgaattgctgcaacccgacaaggccacctctccgccgctccacatgatggccggc
cgcaaggctggctccgccggtcaccagccgtcgcgcgccaccacggccggacccctcacc
cgtgagaccttcgacagccgcgtcgccagcagcgtgcccgagatgggtgccgccgcggcg
gcggcggcgttgggcgccgtgcccggtcccggtcccgggagtatcctgcagtcaagtgcg
cccgcaccgccgctcctaccagaggcttcctacccgcacagcgtcggctctcagcccagt
gcgcccaatgtagggcccgtcccatcgcagacgccatcgcagctaccccagcccgagcgg
tccggcacgtcctcggcctcccagccgtcggctgctggcgccgctggcttgctgccaggc
gtcgcggcggtgtcgccgcaggcatcgcagatgcagggcctatcgccgcctccgcccgtg
cagcaacaggccaacccaccgccaggagtgaccgctgtacagcagcagcagcagccaggc
tcgccaacgggtgttgcgcctgtggcctcgcagggaaattttccgccgggcatgggtccc
ccgtatcaacagcagcaaccgggtcttccgcccggtgttactgtgatgcagccacagcag
cagcaaccgagcttgccaccaggggtgactcagatgcagatctcgcaaccacagcatccg
ggcttgccgccgggggtaacacaaatgcagcagcagccaggcttgccgcccagcgttact
gtgatacatccgcagcaacagcaacagcagccaggcttgccgcccggcgttactgcattg
caaccgcagcaacagcagcagcagccgggtctaccacctggggtcactgcattgcaaccg
cagcagcagcagcagcgcggtcttccgccgggcgtagctgattggcagcagcagcaacaa
caacaaaacttgcctcccggcgtcatgtctatgcaacaaaactaccagcgcagtctgcct
cctggggtcacagatctccagcagcagcagcagcagagcaacgtggcccccggggtcatg
cccattcagcagcgtaacgtggcgcccggtggacgctatggctctccgcaacatgttcag
cagggcggcggaatgtcaacagcgtttgccgtgtcgcccgactcggtcgccgcggtcacc
atcagccgcgcaatgtcggcccagcagcaggcccagcagcctcagccgcataacgtgagc
gccttagccgtccccagctccgcctcccagtcgccgggggagccaacgctagcgtcacgc
ctttccctagagcccctcaaggacgcgctgaccaagagcctgcaggacgagctggaaaag
gtcagcaagcaggtggccgaggtcaaagccagctacgataaacagctcgcagacgtgcgc
gccgagtatgagcgacagctagcggaggcgcgcacggtgcaccagaagcagctgctggac
gtgcgtgcgctggctgaacggcaggttgaggaggcgcgcgcccaccaccgtaagcagatg
gaggacgtgcacgtgcacaacgagcgcaagctggatgaggtccggcggcgcatggagcgg
caggcggaggaggcgcgcgcggcgcaggagcgcgtgctggtggaggcgcgcgctcaacga
gataaggtgttggaggacgcgcggttggcgcagaccaaggcgcttgaagacgcgcgcggg
cagcagcagcgggctctggaggatacgcgggcgctacacgagcgcgtattggcggacacg
caggctgtacacgtgaagcaggtagtggagcttaagaacttgtacgagtcggagctgcgc
cgggccgcacacgatgtcggccgggctgtggatgacacacggcgagtcgcggaagaggcg
cggcgccaggaagcagaggcccgccgtgcaaaggaggaggcggtggccctgcgcgaccgc
atcctgggcctggaggcggagcttcgggctcgggacggggcgctgcgcgaggcagagaca
cgcttcgtgcagctggacacgcgcagcaagacggaattggcggagacacaggcaaacgcc
atcaaagaggcggcgctgatgaagctagagatggaagatgccaaggcggcgctgagccgt
gtacggcagcagtacgaggaggcagccatggcgcacgcggcggaggtcacgaggtatcgg
gcggagctggacgcacagcgcgtcatggcagaggaggagctacagcgcgcgcggcttgcg
acagcggagcagatcgcggctgcggaggcgcgcgggaggcgcgcgggcatgctggacaag
gagattgcggaggcgaccatccggcaacagatggcggctattgcggaggagaaggaggtg
gtggcgcggcaccgcctgagcgcggagctgctggcgcagctgacagaaaaggttcgctcc
gtggcggtgagctccctggagcgcgaggagcgtgcactgtccgccctggagcgcgacgtg
gcggaccgcgaaggccgactggcggcgcgggagaagctgctgggcgagcgcgagggccgc
gtagctcagcgggagcgggaagtggacgcgctacgggcggatctgcagaatctgatggta
acgctggagactagcgctgtgcacgaccgtgaagacctcaagcgcgagcagctgcgcctc
acacgggaggcagctcgtgtggaggcggccacgtcgtccctacaggcggagcgcgaggac
ctgcgggtgcagatcgcgatggagcggcggctgctggaggaggcgcgtgaggcacggcgg
cgggagagggaggatctgctgaccgaggtgacagcggagcggcggcgcctggcgaccgag
tacgcggatacgcagcgccagttggatgcggcacgcacggagctgctggccgtgcgcagc
agacttgtcgacctcgaaagccgctgcagcggcgccgctgcacaggtggccgaggaggag
aagcggctggaggcgctgcgcatagaggcgtcccagacgcgtcaggggttggaggcggag
acgtctcagatccgcaaggcactggaagcagaggtaacacagacccgacaggcgcttcag
gcagaagcgaagcagacacgagaattgctccaagacgaagtggcgcaggcgcgtgagtct
gtgtttgccgaggtgaagcagacacgggagtcgctcaaggcggaggtggcgcgcacgcgg
gcggagctgcaggcggaggccaacgagacaggggaggcactgcgtggggagaaagaggtc
gtcatgttgaagagagccaatgtggacatcgaggctcgggagctggtggagtatgccgcc
aagctgcgggcccagtctgaggagctggccgctcgggctgcggaagcggagttgcgcgac
acccagatcaagaccaccctggagtccctcactcgcaaccaggaagagctgctggccgca
cagaagcaggtggaggagcagcgggtggcgcaggaggccttgaagaaggctctggacaag
gaccgcaaggccctgatggaggagcgccaggggctggcggaggagcgcctggcggcctct
cggtccgcagacgaggcgcgcacggagcagatccgactgatggaggcggtccggacctac
gtgcagcagggcatacccataccctttgcgatggacggcaccagcgggcggcttaagccc
gtgccgccccctatgcgccactcctcaccctcgccggatcgtcaccgcagcggcaagcgc
cgtgggccccgccccaccggccgcagccgcaacgccctcaagtacctactggaccggctc
ggcatggatgccgccatcaccgccgcggagtcgcctcccgggcatctcggcggagctggc
ggggccagcggtagcagctatgtgcgcgcgcagcacgagtttttggagaagatgcggctg
tcggcgacaacgggcccggcgtccgtgggccccaagctcaactccatgacgccaaccgcc
gcggcgcgcgccaccaccgttacttcgccaatacctgcgggtctcaaccccgcgttgctg
ccacccggcctccccgccgcgcacgcgcgcagcgttgttgtcacgcccgtcaagcacgtc
agtactgtgccggtgggtgtcgacgacggtggcggcatcttgacggcgaggggccagctg
gagagcgagatgccagcgtcggcggcaccgctgccgtccttatccgtcggcttggcggac
agtcccggcctggccgccgcggcggttgatcacgacaccctgtcacagctcctcttccgc
cacggcgtcggcgcagcggatgaacaggcgtttggcggcggcgggggtactgccgtcatt
caacagcttctggacacgatacagatggcgctgaaaaagtcaagtcgcgtgagtgcctcc
aaggcttctgacgcaagcgcactagaaaccgcaggccacgcgcaccggactttatcggca
gcggtggtgcagccggaatcccgcagccgcggcggcgcagctaatgtatcccgcgctgtt
aattcgcaacggcggcatgggggtggaagccgccatggcaacgcggcggccggtggggag
ggcgccgcaggtgatggcagcggcgccgcgacgttgccgcgtgtgctcctcaacacaccg
ggcatgggagcgtcattggggttggagtcggaggtgccgttgcgcgacccgatgcagccg
gaaggccaggtgtcgtccatcgcctccctggagcccctcagcgcctccaacggctccttc
gccgacgtcccgcccccccgtgtggaggtcgactcgcctgacctgtccgggcccttgggc
cgcggcttggacctgctggcggaacagcttagcagctccaccgtctttgactccgccgct
gccgccactccggccaacacgctcatgagccgtaccgccgtaggcgccagcctcggcagc
gaggactacgcttttggcctgttgggccatggccgcaacgccacggcggctgcgcggcag
gctcaactgggcgagctggcagctatgagcgaaatgctggcggcgcggctggacgcgctg
gggctgggacagatgggcggagggggaatgacagattcgcaaggcagcggcggctttcgg
ggtgtgagaggaggtggcgtagagggcaccagcctgatgaactccgccaatttgagcccg
cgggtggatatgcctggcggaggcggcatgacgttgcggcagggtacggcggcgcggctg
tcaccattggcagtagcatcgcccaccacgaggacgatgcagtgggctggcgcggctgag
ggtttggcgcgttcgctgacgggcgctggcctcggcggcgcggccgctgcaggatcgatg
gcgacaacaccgcggccgggactgggcattgtcggtggtgggctgggttccacgactcgc
agtgcggcggacaccccgctgctgggatcaaccaatgcggatgcactggccggcttgacg
atgccaccgcaggacgatttcgacatgaatgaggaggatgcggatggtgaggcggcgcga
gaggctggcggtggcggcggtggtgagggcaccctgtcgaccattgcctccgttgacacc
atcagcgacgatgatgaggccgttacgagcatgctgccctaa
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