Volvox carteri f. nagariensis: VOLCADRAFT_86489
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Entry
VOLCADRAFT_86489 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNAPC1
Motif
Other DBs
NCBI-GeneID:
9625332
NCBI-ProteinID:
XP_002946327
JGI:
86489
UniProt:
D8TGU9
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MGKLVPKKSAPASIIPSFEADVHKIIDQFVLKVRRNCFGNGNVATGLRLQGSLQVQGNAP
LKLATFKEIWLDGSFTFIHQAVPLNVPARDFLQLLYAVALNRLADPSPYLDYRPAPCELT
GAAAPTGPEVRKRPGRKKKASGSSGAGAGVGTGQEQLPQADTAAAARPPTSGVDAPGTGN
HATAEDDPLGQEYDLLAHIDELFGGDLLEQDAQYLTGGLPSAVQPHAVPAGNTQGGPPST
GAPPVPLPLSLLALPPGAPHEQQQCIPTLLPAVPVKGGAEQHVRRDPTDPNNATADGVLG
DDDRGGAQLLCSALLAGTSGALGAPTAPWGLEEEDDYDGSAAPAAVPAVPAAASLAAASS
WGGLALPGVGTCLRGLCTEAAEDHVGLPSPSYKHHHYQQQQQQQQQQTTPALPQSFLLSQ
PAGDPVLGVPEEVTAAAAAQQQPPGGFAAVRSDAAASAAQLMRPAKAVAGTSEERTGAHP
PHLGSGRTGPAADVLPAQAAHPHWSPSSDLHPETSGPAVGPAPTAPAGPLRGPGPDLPSN
PTVATGRPPSGGAAPAEGAAAPPCEGSIPGAILQLPTLPLALLHPQSAPQHQRPPAAQPE
VPGAAPRWTPRSAQQQHAAELVGPAADGPGAATGRELGTVAAPADEPEPGGVRSPATAVA
TAVDADVGPLVPGAGAGAGAGGGGGTPVAAVGHQPADAEGREAANLLHVSNTLPAGLPPP
GPDVPLSARVGAIYAVYCLYGTQLCQPPVRVYLPLALLSCLVETVREAAAAGLRDVVAVV
RELWRGGALVPGGVARYLGATTPPRLESGAAAAAGRAQAIAAGRWVAGQRLDPFRTREAT
FYEVLVSNPVLRQALLHLRTALPLLADLESFQMLCELYGQQREAVFRSDDGGGSGLPDVL
FEARVGGDVRRGVRAMFAEVLKALRRPPAHRRRAEEKRLQRELEVHRAAEEAARAEAEAA
AGPRTVAEALAQVAARPPAPPRRRVAGELGALMRKRAMQRPGEGEAAGLGGGGGIGRAGG
WLGPVSSGRPGQRRVVVIRHRSELASAGLLSGEGSRGAAPPGVPPRVLQAEEARRQRVQD
VADTWLTRHDRLMGAERGDTEEEQRPRPPSTQQQQQPQQQQLLPRRQRADTDPARGPGAG
TAAGVYGSYVRGGTTSDSGDLLQRGGRTVGQVVMAGRGEGGPGIPGPSLPSGVDANITAG
EDDDADDDFDVDAELEAAFAEMEEVAVDSPSPKKHVTSPAKAAAATAAAAAAAAGVDNNK
AARTGSTRVQEPSPGGVCGRGRGRRNAVQGRGRGRGEFADGGSAGGDVSGGAGGQGQQAP
SSAVKSSSPLPVLADVHPRLNVTCGGVSGVMDTRTRIVSCGCESCATAAAFAAAALIRRS
PGHPRGGGSGDAEQQQSPQAKQILAMQWPEHCGIPGGEKKWQTLIQVVVCDEEEISRGTE
AVRRPSLEAFLRRNGLLLGRRVSAAAAAVGDPGAPPGGGRGQGRGGRQPGPSRSPRARGR
GRGGGRGGRLGKRSRSAAHVDTTEEEDDEDGIGDAAGSEGYQEEGGLGPRCNAAGGAEAP
SQDGLAIDLKPSQDAAGLPQRKRARGSHVAQGRDADDDSYGTTAARTRVGAALANGPRGA
CGVGAAGVVKPETEAEADAGKFGGAGGQGSQLDFDDLLEELGQADAELIRQTQLALRAQR
EALEMLQRMRLPPQPLDTATQQRPRALTALVPPAAAFAAEPVAANNGTSILGAVPAASRR
LTARPPLPPRAAPAARRQQQQQQQQQQQQRERAKPEAGREAEVKLPKPRKRRACGVECGR
QDDATMGRVATGVTGGEQLVTTGVELQVAAAAVEAADGKHPRRRRPAADFNPSWGMKTEE
VEAGLHQAVDKVADPADGQTRARPPGEGRDPGDCNAVQGADAAVYGKDENKDATRKPPMG
DPGQANMACLPAKDDDDDLADFDAMFAALKAVNGL
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctggtgcccaagaagtctgcgccggcatccataattcccagctttgaagcg
gatgttcataagattattgatcagtttgtactaaaggtccgcagaaattgttttggaaat
ggtaacgtagcaactggcttacgactccaaggttcattgcaggttcagggcaacgccccg
ctgaagcttgctacctttaaggaaatatggcttgatgggtctttcactttcatccatcag
gctgtaccactcaacgtaccggcaagagactttttgcagctgttatatgccgtcgcgcta
aaccgcttagctgaccccagtccgtacttggactataggcccgctccatgcgagctaacc
ggtgccgcagcccctaccggaccggaggtgcggaagcgacctggtcgtaagaagaaggcc
tcaggaagctcgggcgctggagcaggcgtcggcactgggcaggagcagctgcctcaggcc
gacaccgcagcggccgctagaccccccaccagtggcgttgacgcccctggcaccggcaac
catgccacagcagaggacgatcctcttggccaggaatacgacctgttggcccacatcgat
gagctattcggaggtgacctgcttgagcaggacgcccagtacctgacaggcgggctgccg
tcggcagttcagccacatgctgtccctgccgggaacacccaggggggcccgccgagcacc
ggggccccccccgtgccactgccgctgtcgctgctggcgcttcccccgggtgcccctcat
gagcagcagcagtgcatacccacactgctccctgcggtccctgtgaagggaggtgcagag
cagcatgtgagacgggaccccacagaccccaacaacgccaccgcggatggcgtcttaggg
gatgacgaccggggcggcgcgcagctgctgtgttcggccttgctagctggcacgagtggg
gcactgggggctcccacggcgccatggggcttggaagaggaggacgactacgacggctct
gctgcacctgccgcagtcccagcagtccccgcagccgcttccttggctgcagcttccagt
tggggcggcctggcgctgcccggggttggcacctgtctgcggggcctgtgcacggaggca
gctgaagaccatgtagggttgccttccccgtcctacaagcaccaccattatcaacaacaa
cagcagcaacagcaacagcaaacgacgccagcgttgccgcagtccttcctattgtctcaa
cccgcgggtgacccggtgctgggggtcccggaggaggtgacggcggcagcagcagcgcag
caacagccgccaggggggttcgccgcggtccgctccgatgcagctgcctctgccgcgcag
ttgatgcgtcccgctaaggcagtggcgggcacttcagaggagcggacgggagcgcacccc
ccccacctgggcagcgggcgaaccggtcctgccgcggacgtcctgcccgcacaggccgcc
cacccgcactggagcccctcctcggacctccacccggagacatcggggcctgccgtcggg
cctgcccccacagcccccgcaggtcctttgagaggtcctggtccagacctgccctcgaac
cccacggtcgcgacggggcggccccccagcggaggtgcagcccccgccgagggcgctgcg
gcaccgccgtgtgagggcagtatcccgggggcgatactccagctcccaacgctgcctctg
gcgctgctgcacccgcagtccgcaccgcagcatcagcggcctcctgcagcgcagccggag
gtaccaggtgccgccccgcggtggacccctcgctccgcccagcagcaacacgcggccgag
ctggttggcccagcggctgatggccccggggctgcgacagggcgggagctgggcaccgtg
gctgcacccgccgacgaacccgaaccggggggtgtccggagcccagcgacagcggtggcc
actgcggtggatgcagatgtgggtccgttggtaccgggtgcgggtgcgggtgcgggtgcg
ggtggggggggcggaaccccggtagctgcagttggccaccagcccgcggatgctgaaggc
cgagaggccgcgaacctgctgcacgtatcaaataccctaccggcggggctgccgcctccc
gggccggatgtaccgctgtccgctcgcgtgggagctatctatgccgtgtactgcttgtac
ggcacgcagctatgccagcctcccgtacgggtgtacttgccgctggcgctgctgagctgt
ctggtggagacggtcagagaggcggcagctgctggactaagggacgtggtggctgttgtg
cgggagctctggcgcgggggggctctggtgccgggtggtgtggctcgctacctgggggcc
accactccgcccaggctggagagcggggccgcggccgccgccggacgggcccaggccatc
gccgcgggtcgctgggtcgccggtcagcggctggatcccttccgcacccgcgaggccacc
ttctacgaggtcctcgtgtccaaccccgtcctgcgccaggcgctactgcacctccgtacg
gccctgcccctcctcgcggacttggagtccttccagatgctctgcgagctgtacggccag
cagcgggaggcggtcttcagatccgacgacggcggcggcagcggcttgcctgatgtgcta
tttgaagcgcgtgtcggtggggatgtacggcgtggagttcgggctatgtttgcggaggtg
cttaaggcgctgcggcggccgccggcgcaccgccgccgcgctgaggagaagcggctgcag
cgcgagctggaggtccatcgagctgcggaggaggcggcgcgtgcggaggcggaggcagct
gcaggcccgcgcacggtggcagaggcgctggcgcaggtggcggcgcggcccccagccccc
ccgcgtcggcgcgtggcgggggagctgggtgcgctgatgcggaagcgcgccatgcagcgg
cctggggaaggggaggctgcggggttgggagggggcggcggtattggtcgtgcggggggg
tggctgggcccggtcagcagcggccggccgggccagcgccgcgtggtggtcatccgccac
aggagcgagttggcatctgccgggctgctgagcggggaggggtcgcggggcgccgccccc
ccgggggtacccccccgcgtgctgcaggctgaggaggcgcggcggcagcgggtgcaggac
gtggcggacacctggctcacccgccacgaccgactgatgggcgcagagcggggcgacacg
gaggaggagcagcggccacggccgccttcaacccagcaacagcagcaaccgcaacagcag
cagctgttgcctcggcgacaaagagcggacacggaccccgcacggggacctggtgcgggg
acggcggctggggtttacgggtcgtacgtccgcggtggcaccacatcggattcaggcgac
ctgttacaacgcggagggcggacggtggggcaggtggtgatggcgggtaggggcgaaggc
ggtcccgggattccggggccgtcgctgccgagcggtgtggatgccaacatcactgctggt
gaggacgacgacgcagacgacgatttcgatgtggatgcggagctggaagcggcctttgcc
gagatggaggaggtcgccgtcgactcaccctcccctaagaaacacgtaacgtcaccagca
aaagcagcagcagcgacagcagctgctgcggcagcagcagcgggagtggacaacaataaa
gcagctcgcacaggcagcaccagggttcaggagccgtcgcccgggggggtttgcggtcgc
ggtcgcggtcgaaggaatgccgtgcagggacggggccgaggtcgcggcgagttcgctgac
ggcggtagtgctggcggcgacgtctctggcggtgcagggggacagggacagcaggccccc
agcagcgctgttaagagcagctccccgctgcccgtcctggctgatgtccacccgcgcctc
aacgtcacgtgtgggggcgtctcaggcgtcatggacacgcgcacccgcattgtgagttgc
ggttgtgagtcctgtgccaccgccgccgcctttgccgccgcggccctcatcaggcgcagc
cctggtcacccgcggggcggcggcagcggcgatgcggagcagcagcagtccccgcaggcg
aagcagatcctggccatgcagtggcccgaacactgcgggatcccgggcggtgagaagaaa
tggcagaccctgattcaggtggtggtgtgcgatgaggaggagataagtcggggcactgag
gcagtacgacggccctccctggaggcgttcctgcgccgcaacgggcttctgttaggccga
cgagtatcagcagcagcagcagcagtcggggatcccggggcacctccgggtggagggcga
ggtcagggccgcggcgggaggcagcccgggccatcgagatccccccgcgcgcggggccgt
ggtcgcggcgggggccgcggtgggcgattgggcaagcgctcgcgctcagctgctcatgtc
gacaccacggaggaagaggacgacgaggatgggatcggtgatgctgccgggtccgaagga
tatcaggaggagggagggctcggcccccggtgtaacgcggcgggaggggccgaggctccc
agtcaggatgggctggcaatcgatctcaaacccagtcaagacgcggcagggctgccgcaa
aggaagcgcgcgcggggatcacatgtggctcaggggcgggatgccgatgacgactcctat
ggcaccacagctgcaagaacccgtgtaggggcggcgctcgcaaacggtccccgaggcgcc
tgcggggttggtgctgcgggagtagtgaagcccgagaccgaggctgaggctgacgctggc
aagttcggcggtgctggcggtcagggcagtcagctggatttcgacgacctgctggaggag
ctcggccaggctgatgcggagctcattcggcagacgcagctcgctctgcgggcgcagcga
gaggccttggagatgctgcagcgaatgcggttgccgcctcagcctcttgacactgcaacc
cagcaacggccgcgcgccctaacagcgctggttccgccagctgcggcgtttgctgcggag
ccggtggccgcaaataacggaacctcgatcctgggggccgttccagcagctagccgccgc
ctcacggctcgtccgcctctaccgcctcgggcagctccagccgcgcgacgtcagcagcag
caacagcagcagcaacagcagcagcagagagagcgcgccaagcctgaagctggccgagaa
gctgaggtgaagcttcctaagccgcgcaagcgccgcgcctgcggtgtcgagtgcgggcga
caggacgatgctacgatgggtcgcgtggccacgggcgttactggaggggaacagctcgtg
accacgggtgtggaactgcaggtcgcagcagctgcagttgaggcggcggatgggaagcac
ccgcggcgtcggcgccctgcggctgattttaatccaagttggggaatgaagacggaagag
gtggaggcagggctccatcaggctgtcgacaaagttgcagatcctgcggacggtcaaacc
cgagccaggcccccgggagaaggccgcgacccaggggactgcaatgcggttcagggtgcg
gatgcagctgtgtacgggaaggatgaaaacaaagatgcaacacggaagccgccaatgggc
gaccctggacaggcgaacatggcatgtctacctgccaaagacgacgacgatgacctcgct
gacttcgacgccatgtttgcagccctgaaggccgtgaacggcctgtga
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