Volvox carteri f. nagariensis: VOLCADRAFT_86599
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Entry
VOLCADRAFT_86599 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
VOLCADRAFT_86599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_86599
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
VOLCADRAFT_86599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
9617612
NCBI-ProteinID:
XP_002946382
JGI:
86599
UniProt:
D8TJ36
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MYLTIPGIYARTRVLCHQTSAGAAGPGMTVFPRAELLNQTSHHNDKSRRHSLVGLADLFG
RHPEQLRLHASQVMGTLAERIVDGDSSVRSALRELLHGSVLPLLGQDALRPFMPVVMAHI
CGAMTHLSLDIRNDALLFLDVMMDHVPQLVVKGFLPPCLAHFCDIFSAAHRGRSIRAQSL
AALSKLLTALTNFLKRAFPDEDSPGAAAAPPVGAAVDAPTAGPGPSSVRQQQLRAQTRSL
AARPGAPLGADRLRRPQRSAYELLRQLDELFHAAAAATRAGRKRGKPGGGDAATGGTVDK
GRHKKGRGSVSTTETAAAVASGGKGVAAAAAALAAVTSPAAATAAGVELSSASGSAAAGV
LGAPTAMAAALAAASDARASALRLVSLLMDPCWLECNPAQLATSPELDQATALAMIVAAC
NSLIQRLLLPPQPHDQQVGGGDGLSWTGTYPPLPRQRQQQQQRQGVWQGQGPPLLGEQRL
ALTQQLHDVAARRVAAHFPAVLPPVKPPAAVTEALVRLNLQSAELLGRFLPLLAHSRHGV
GQPQQISGATAAAAGNGSGGGVAATALPWVPALVSYYAGALEQGVLLPAAAGTLSDASGA
GAAAGQSLSAATADVVLTAVSAALGQLDDAAAARLMSAVSQFAARQPPRSGARLACIRIQ
HSLLLAAVAGRLFLAEGVVSGWLEPLPKLLWEVGGGSAEVSYAALALLLDAARFAIPGSP
MCQFLSSQLQPQLAPLLAVQLPAKAAKAAAAKLAAAASAEVPIVGAGGAAGEVLVVLPGA
LSKLPEQVAELGVDLIYHTGALGGPLLKPLAAALSSTALSPSLARRLLDVVLVRLRDAPD
PALAASWLLTLLFGPQHGLRVISPEGTDLTASWARQRALVDAAVMGLGQLGGAAPLLLVL
APQLAALPLAQATSAGARGARLQRYSLIRLCAAAVGEPGGDKLPPAGPLAEALPAAAALC
GIEAGAAAASGEPDGAMAILPYRSTFGPVVQLLTERPVLATAVVRHLAALLRSMAGSEAV
APATTVGCLPLHTAALAALQLAQAVVKLQPVRTALAAAGSEREGLLGAVEELGAAVRNLP
VAAAGSGPVCPLVVVQPPRTGEWNEGCKLAAEAVKKLAVGTHRAWCNIMVGAAEQALAGK
WAKV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcactatacctggcatctacgcgagaacgcgagtattatgccaccagacgtcg
gcaggagctgcgggtcccggaatgacagtctttcctcgcgctgagctgttgaatcagacg
tcacaccacaatgacaaatcgaggaggcactcgcttgtcggcttggcggacctgtttggc
aggcatccggagcagctacgcctccatgcctcgcaggtaatgggcacgctggcggagcgc
atcgtcgatggcgacagcagcgtccgatcagcactgcgggagctactccacggcagcgtg
ctgcctctgctgggccaggacgcattgcgtcccttcatgcccgtcgtcatggcgcacatc
tgcggcgccatgacgcacctgagtttggacatccgcaacgacgcgttgctcttcctggac
gtgatgatggaccacgtaccccagctggtggtgaagggcttcttgccgccctgtctggcg
cacttctgtgacatcttctcggcagcgcacagaggtcggagcatccgagcgcagtccctg
gcggcgctgagtaaactgctgacggcactcacgaacttcttgaagcgcgcatttccagat
gaggactcgcccggtgcggcggcggcgccgccggttggcgccgccgtggatgcgccgacg
gctgggccaggtcccagcagtgtacggcagcagcagctgcgggctcagacgcggtcattg
gctgctcgtcctggtgcgccgctaggggctgaccgcctgcggcggccgcaacggtcggca
tacgaacttctacggcagttggacgagctatttcatgcagccgccgcagcgacccgggcg
gggcggaaacgtggcaaacccggcggcggcgacgccgcaaccggcggcaccgtagataaa
ggccggcacaagaagggccgtggcagcgtcagtacaacagaaacagccgccgctgttgcc
agcggcggcaagggcgtcgcagcggccgcggcggcgctggcggcagtgacgtccccggcg
gccgcaacggccgcgggagtggaactctcctctgcctcaggatccgcggccgccggggtg
cttggcgcgcccacggcgatggcggcggctctggcggcagcctccgacgcgcgcgccagc
gccctgcggctggtgtccctgctcatggatccctgctggctggaatgcaaccccgcgcag
ctggccacgtccccggagcttgaccaggcaactgcactggccatgattgtggctgcatgc
aacagtctcatccagcggttgctactcccaccgcagccgcacgaccagcaggttggcggt
ggtgatggattgagctggacggggacctacccacctttgccccgccagcggcagcagcag
cagcagcggcagggtgtgtggcaggggcagggacctcccctcttgggggagcagcggctg
gcgctgacgcagcagctccacgacgtggcggcgcggcgtgtggcggcgcacttccctgcc
gtactgccgccggtgaagccgccggcggcagtgacggaggcgctcgtacggctgaacctg
cagagcgctgagctattgggccgctttctgcctctgctggcgcactctcggcacggcgtt
ggacagccgcagcagatttccggagctaccgcggcggcggcgggaaacggcagtggcggc
ggcgtggcggcgacggcgctgccctgggtgccggcgcttgtatcgtactatgcaggcgcc
ctagagcagggggtgctgctgccggcagcggcggggacgttgtccgatgctagcggggcc
ggcgcggcggcggggcagagcctgtcggcggccaccgctgacgtggtgctgacggcggtg
tcggcggcgctggggcagttggacgacgccgcggcggcccggctaatgtcggcggtgtcg
cagtttgctgctcggcagcctccgcggtcgggtgcccgcctggcgtgtattcgcatccag
cattcgttgctgctagctgcggtggcgggtcgtctcttcctggcggagggagtggtgagt
ggttggctggagccgctgcccaagctgctgtgggaggtcggtgggggctccgcagaggtg
tcgtacgccgcgctggcgctgctgctggacgcggcgcggtttgcgatacctggctccccc
atgtgccagttcctgtcctcccagctgcaaccccagctggcgccgctgctcgcggtgcag
ctgccggccaaggcggcgaaggcggcggcggccaagctcgccgcagctgcgtcagcggag
gtgcccattgtgggggcaggtggtgctgctggtgaggtgctggtggtgcttcccggagcg
ctatccaagctgcctgagcaggtggccgagctgggggtggacctcatctaccacacgggt
gctctgggtgggcccctgctcaagcccctggccgccgccctgtcctccaccgccctatcg
ccctccctggcgcggagactgctggacgtcgtcctagttcgactgagggacgcacccgac
ccggccctggcagccagctggctgctgacgctgctgttcggaccccagcacggcctgagg
gtgatatcgcctgagggcactgacttgacggccagctgggcccggcagcgcgcgctggtg
gacgcggcggtgatgggcttggggcagctaggcggcgctgcgccgttgctgttggtgctg
gcgccgcagctggcggcgctgccgctggcacaggcgacgtcagcgggcgcgcgaggcgcg
cggctgcagcgctacagcctaattaggctgtgtgccgccgcggtgggagagcccggggga
gataagctgccaccggcggggccgctggcggaggcgctgccggcggcagcggcgctctgt
ggcattgaggctggcgccgcggcggcgtcaggggagccggacggcgctatggctatactg
ccgtacaggtcaacgtttggacccgtagtgcaactgctgacggagcgcccggtgctagct
acggcagttgtacggcacttagctgcgctgctgcgcagcatggcggggtcggaggctgtg
gccccggctacgacggttggctgtttgccgctccacacggccgcccttgcggcgctgcag
ttggctcaggcggtggtgaagctgcagcccgtgcgtacggcactggctgcggcgggttcg
gagcgggagggattactaggggcggttgaggagcttggagcggcggtgcgcaacctgcct
gtggcagccgcggggtcggggcccgtgtgccctcttgtggtagtgcaacctccccgcacc
ggggaatggaatgagggctgtaaacttgcggcggaggcggtgaagaagctcgctgtggga
acacatcgcgcatggtgcaatatcatggtaggcgccgccgagcaagcacttgcaggcaaa
tgggctaaagtctga
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