Volvox carteri f. nagariensis: VOLCADRAFT_87452
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Entry
VOLCADRAFT_87452 CDS
T01330
Symbol
metH
Name
(RefSeq) vitamin B12 dependent methionine synthase
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
9620230
NCBI-ProteinID:
XP_002947125
JGI:
87452
UniProt:
D8TLD6
LinkDB
All DBs
Position
Unknown
AA seq
2783 aa
AA seq
DB search
MKLGQAFDTLWRYPIHVILAVVASAACGAAAWPVLLPLIASLSVIAIPAFALAAQRAIKQ
PIAEPAEEVAVSVGTAEARICGHDAGAEEPEAATAASAGASEAPVVQQPAVHAQLDKLLR
ERIIFIDGAMGTQVQKYKLQEEDFRGERYANHSHELKGNNDVLVITRPDVIGEIHTAYLE
AGADIIETNTFNGTCISQADYELQADEEVALINRTAAQLAKKCVKDFLAAHPESGPRFVA
GAIGPTNKTLSVSPSVENPAFRGITYDEVVDAYYKQIEALYEGGVDMFLVETIFDTLNAK
AAVFALEQFFTDRGVRVPVFISGTIVDNSGRTLSGQTNEAFWNSINHAKPMAVGLNCALG
ASDMLKYIANLSACADCYVLCYPNAGLPNAMGGYDQKGGEMAEEIRPFCEAGLVNAIGGC
CGTGPEHIAAIKAMASAYPPRKPPATEPLMRISGLEPLNYNPDPANMRRTFLNIGERCNV
AGSILFKKAIINNDYEKAVAIALQQVQQGADVLDINMDDGLIDGVAAMTRFVNLLVSDPE
ISRVPFMIDSSKFHIVEAGLKCSQGKCIVNSISLKEGEEAFCKQAEIVKRHGAAVVVMAF
DEQGQAAGYADKVRICCRAYKLLVEQVGFNPQDIIFDPNILTIGTGLPEHNNYAVDFIRA
TREIKRLCPGAKISGGVSNIAFSFRGNEAVRRAFHSAFLLHACAAGMDMGIVNAAQVKED
AYDKIDKELLEFVEDVLLNRRDDATERMLEFAATLDPKSPPTNVRRLNSQQPSGPKITPR
LNPIPKGFDPLAPDSDLPPVPSYKACIEKRQESPVFGQLDKLLRERIIFIDGAMGTQVQK
YKLEEEDFRGERYANHSHELKGNNDVLVITRPDVIGQIHTAYLEAGADIIETNTFNGTCI
SQADYELQADEEVALINRTAAQLAKKCVKDFLAAHPESGPRFVAGAIGPTNKTLSVSPSV
ENPAFRGITYDEVVDAYYKQIEALYEGGIDMFLVETIFDTLNAKAAVFALEQFFTDRGVR
VPVFISGTIVDNSGRTLSGQTNEAFWNSINHAKPMAVGLNCALGASDMLKYIANLSACAD
CYVLCYPNAGLPNAMGGYDQKGEEMAEEIRPFCEAGLVNAIGGCCGTGPEHIAAIKAMAS
AYPPRKPPATEPLMRISGLEPLNYNPDPANMRRTFLNIGERCNVAGSILFKKAIINNDYE
KAVAIALQQVQQGADVLDINMDDGLIDGVAAMTRFVNLLVSDPEISRVPFMIDSSKFHIV
EAGLKCSQGKCIVNSISLKEGEEAFCKQAEIVKRHGAAVVIMAFDEQGQAAGYADKVRIC
CRAYKLLVEQVGFNPQDIIFDPNILTVGTGLPEHNNYAVDFIRATREIKRLCPGAKISGG
VSNIAFSFRGNEAVRRAFHSAFLQHACAAGMDMGIVNAAQVKEDAYDKIDKELLEFVEDV
LLNRCENATERMLEFAATLDPKSPPTNVRRLNSQQPSGPKITPRLNPIPKGFDPLAPDSD
LPPVPSYKACIEKRQESPVFGQLDKLLRERIIFIDGAMGTQVQKYKLEEEDFRGERYANH
SHELKGNNDVLVITRPDVIGQIHTAYLEAGADIIETNTFNGTCISQADYELQADEEVALI
NRTAAQLAKKCVKDFLAAHPESGPRFVAGAIGPTNKTLSVSPSVENPAFRGITYDEVVDA
YYKQIEALYEGGIDMFLVETIFDTLNAKAAVFALEQFFTDRGVRVPVFISGTIVDNSGRT
LSGQTNEAFWNSINHAKPMAVGLNCALGASDMLKYIANLSACADCYVLCYPNAGLPNAMG
GYDQKGGEMAEEIRPFCEAGLVNAIGGCCGTGPEHIAAIKAMASAYPPRKPPATEPLMRI
SGLEPLNYNPDPANMRRTFLNIGERCNVAGSILFKKAIINNDYEKAVAIALQQVQQGADV
LDINMDDGLIDGVAAMTRFVNLLVSDPEISRVPFMIDSSKFHIVEAGLKCSQGKCIVNSI
SLKEGEEAFCKQAEIVKRHGAAVVVMAFDEQGQAAGYADKVRICCRAYKLLVEQVGFNPQ
DIIFDPNILTVGTGLPEHNNYAVDFIRATREIKRLCPGAKISGGVSNIAFSFRGNEAVRR
AFHSAFLQHACAAGMDMGIVNAAQVKEDAYDKIDKELLEFVEDVLLNKCENATERMLEFA
ALLEPKCKPTAVVKKGATQGAAGAGAKKEESWRDLPVEKRIEYALVKGIDEFAVVDTEEA
RTCGRYTKPLHVIEGPLMDGMNVVGDLFGAGKMFLPQVIKSARVMKKAVGHLVPFIEEEK
RLSGTVGEDSNAGVFVLATVKGDVHDIGKNIVGVVLGCNNFKVIDLGVMTPWDVILDAAE
KHKANIIGLSGLITPSLDEMVTVAKKMEERGLKTPLLIGGATTSKMHTAVKIAPVYSGPV
VHVLDASRSVPVCQAFVDKNLTQRQEFISEVAEQYAELREEFYASLEDRKYLSLAEARKR
AFAVDWKDPINTPFKPKVLGNTVFTEYPIEDVLPYIDWNPFFQVWQLRGRYPNRGFPRIF
NDATVGAEAKKLYEEAQVMLNDFVKNKRVTLKAVVGLYPAAAVGDDIEVYTDESRSSVKA
RLAGLRQQAEKDGVEPYYCISDFVAPKGSGLEDYVGMFACSAGHGLEEVIAGFKAAGDDY
SYIMAEALADRLAEALAERLHELVRRDYWGYAADEQMSVDDMLKVKYQGIRPAPGYPSQP
DHTEKLTMWGLLDAEATTDIKLTESLAMWPAASVSGLYFGGRCSSYFAVGKITREQVEDY
AVRKNMDIKDAERWLATMLNYEP
NT seq
8352 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcggacaagcctttgacacgttatggaggtatcctatacatgtcatcttggct
gttgtggcttcggcggcgtgcggagcagcggcgtggcctgttttgctgccgctgattgca
agtctgtccgtgatcgcaatcccagcgtttgcgcttgcagcgcagcgcgcaataaagcag
cccatcgcggagcccgccgaggaggtcgcagtaagcgtcggcactgcggaggcgcgaatt
tgtggccatgacgccggggctgaggagccggaggcggcgacggctgcctccgccggagcc
agcgaagcacccgtggttcagcagcctgcagtgcatgcccagttggataagctgctccgg
gagcgcatcatcttcattgatggcgctatgggcacgcaggtgcaaaagtacaagcttcag
gaggaggatttccgtggcgagcggtatgccaaccacagccacgagctcaagggcaacaac
gacgtgctggttattacccggccggacgtgatcggcgagatccacacggcgtacctggag
gcaggggctgacattattgagaccaacactttcaatggcacatgcattagccaggcggac
tacgagctgcaggcggatgaggaggtcgctctcatcaaccgcacggcggcccaacttgcc
aaaaagtgcgtcaaggacttccttgcagcccatccggagagcggcccgcgcttcgtggcg
ggcgccatcgggcccaccaacaagaccctcagcgtgtcgcccagcgtggagaacccagca
ttccgcggcatcacgtacgatgaggtggtggatgcgtactacaagcagattgaggcgctg
tacgagggcggcgttgacatgttccttgttgagaccatcttcgacacgctgaacgccaag
gcggccgtgtttgcgctggagcaattcttcacggaccgtggtgtgcgtgtgcccgtgttc
atcagcgggaccatcgtcgacaacagcggccgcacgctgagcggccaaaccaacgaggcg
ttctggaacagcatcaaccacgccaagcccatggctgtgggcctcaactgcgctcttggc
gccagcgatatgctcaagtacatcgccaacctgagcgcctgcgcggactgctacgtgctg
tgctacccgaacgcgggcctgccgaatgccatgggcggttacgaccagaagggcggggag
atggcggaggagatccggccgttctgcgaggctgggctggtcaatgccatcggcggctgc
tgcggcacgggtccggagcacatcgcggccattaaggcgatggcgtctgcgtacccacct
cgcaagccgccggcgactgagccgctgatgcgcatcagtggcttggagcctctgaactac
aacccagaccctgccaacatgcgccggaccttcctcaatatcggggagcggtgcaacgtg
gcgggcagcatcctgttcaagaaggccatcatcaacaacgattacgaaaaggccgtggcc
atcgcgctgcagcaggttcagcagggtgcggacgtattggatattaacatggacgacggc
ctgatcgacggggttgcggctatgacccgtttcgtgaacctgctggtcagcgaccctgag
atcagccgggttccgttcatgattgacagcagcaagttccatattgtggaggccggtttg
aagtgcagccagggcaagtgcatcgttaacagcatcagcttgaaggagggcgaggaggca
ttctgcaagcaggcggagatcgtgaagcgtcacggcgctgctgtagtggtcatggctttc
gatgagcagggccaggcagccggctatgccgacaaggtccggatctgctgccgtgcgtac
aagctcctggtagagcaggtgggcttcaacccgcaggatattattttcgaccccaatatc
ctcaccatcggcacgggcctgccggagcacaacaactatgcggtggactttatccgcgca
acccgcgaaatcaagcggctgtgcccgggcgccaagatcagcggcggcgtcagcaacatc
gcgttcagcttccgcggaaacgaggcggtccgtcgcgccttccacagcgccttcctgctg
catgcttgcgctgctggcatggatatgggcattgtcaatgcggcacaggtgaaggaggac
gcttacgacaagatcgacaaggagctgctggagttcgtggaggatgtgctgctaaacagg
cgtgatgatgccaccgagcgcatgctggagtttgcggcgacgctggacccaaagagccct
ccaactaacgtccggcgcctgaacagccagcagccctccggccccaagattacaccgcgg
ttgaaccccattccgaagggcttcgacccgttggcgccggacagtgacctgccgccggtt
ccatcctacaaggcgtgcattgaaaagcgccaggagtcccctgtgtttgggcagttggat
aagctgctccgggagcgcatcatcttcattgatggcgctatgggcacgcaggtgcaaaaa
tacaagcttgaggaggaggatttccgtggcgagcggtatgccaaccacagccacgagctc
aagggcaacaacgacgtgctggttattacccggccggacgtgatcggccagatccacacg
gcgtacctggaggcaggggctgacatcattgagaccaacactttcaatggcacatgcatc
agccaggcggactacgagctgcaggcggatgaggaggtcgctctcatcaaccgcacggcg
gcccaacttgccaaaaagtgcgtcaaggacttccttgcagcccatccggagagcggcccg
cgcttcgtggcgggcgccatcgggcccaccaacaagaccctcagcgtgtcgcccagcgtg
gagaacccagcattccgcggcatcacgtacgatgaggtggtggatgcgtactacaagcag
attgaggcgctgtacgagggcggcattgacatgttccttgttgagaccatcttcgacacg
ctgaacgccaaggcggccgtgtttgcgctggagcaattcttcacggaccgtggcgtgcgt
gtgcccgtgttcatcagcgggaccatcgtcgacaacagcggccgcacgctgagcggccaa
accaacgaggcgttctggaacagcatcaaccacgccaagcccatggctgtgggcctcaac
tgcgctcttggcgccagcgatatgctcaagtacatcgccaacctgagcgcctgcgcggac
tgctacgtgctgtgctacccgaacgcggggctgccgaatgccatgggcggttacgaccag
aagggcgaggagatggcggaggagatccggccgttctgcgaggctgggctggtcaatgcc
atcggcggctgctgcggcacgggtccggagcacatcgcggccattaaggcgatggcgtct
gcgtacccgcctcgcaaaccgccggcgactgagccgctgatgcgcatcagtggcttggag
cctctgaactacaacccagaccctgccaacatgcgccggaccttcctcaatatcggggag
cggtgcaacgtggcgggcagcatcctgttcaagaaggccatcatcaacaacgattacgaa
aaggccgtggccatcgcgctgcagcaggttcaacaaggcgcggacgtactggatattaac
atggacgacggcctgatcgacggggttgcggctatgacccgtttcgtgaacctgctggtc
agcgaccctgagatcagccgggttccgttcatgattgacagcagcaagttccatattgtg
gaggccggtttgaagtgcagccagggcaagtgcatcgttaacagcatcagcttgaaggag
ggcgaggaggcattctgcaagcaggcagagatcgtgaagcgtcacggcgctgctgtagtg
atcatggctttcgatgagcagggccaggcagccggctatgccgacaaggtccggatctgc
tgccgtgcgtacaagctcctggtagagcaggtgggcttcaacccgcaggatattattttc
gaccccaatatcctcaccgtcggcacgggcctgccggagcacaacaactatgcggtggac
tttatccgcgcaacccgcgaaatcaagcgactgtgcccgggcgccaagatcagcggcggc
gtcagcaacatcgcgttcagcttccgcggaaacgaggcggtccgtcgcgccttccacagt
gctttcctgcagcatgcttgcgctgctggcatggatatgggcattgtcaacgcggcacag
gtgaaggaggacgcttacgacaagatcgacaaggagctgctggagttcgtggaggatgtg
ctgcttaacaggtgtgagaatgccaccgagcgcatgctggagtttgcggcgacgctggac
ccaaagagccctccaactaacgtccggcgcctgaacagccagcagccctccggccccaag
attacaccgcggttgaaccccattccgaagggcttcgacccgttggcgccggacagtgac
ctgccgccggttccatcctacaaggcgtgcattgaaaagcgccaggagtcccctgtgttt
gggcagttggataagctgctccgggagcgcatcatctttattgatggcgctatgggcacg
caggtgcaaaaatacaagcttgaggaggaggatttccgtggcgagcggtatgccaaccac
agccacgagctcaagggcaacaacgacgtgctggttattacccggccggacgtgatcggc
cagatccacacggcgtacctggaggcaggggctgacatcattgagaccaacactttcaat
ggtacatgcatcagccaggcggactacgagctgcaggcggatgaggaggtcgctctcatc
aaccgcacggcggcccaacttgccaaaaagtgcgtcaaggacttccttgcagcccatccg
gagagcggcccgcgcttcgtggcgggcgccatcgggcccaccaacaagaccctcagcgtg
tcgcccagcgtggagaacccagcattccgcggcatcacgtacgatgaggtggtggatgcg
tactacaagcagattgaggcgctgtacgagggcggcattgacatgttccttgttgagacc
atcttcgacacgctgaacgccaaggcggccgtgtttgcgctggagcaattcttcacggac
cgtggtgtgcgtgtgcccgtattcatcagcgggaccatcgtcgacaacagcggccgcacg
ctgagcggccaaaccaacgaggcgttctggaacagcatcaaccacgccaagcccatggct
gtgggcctcaactgcgctcttggcgccagcgatatgctcaagtacattgccaacctgagc
gcctgcgcggactgctacgtgctgtgctacccgaacgcgggcctgccgaatgccatgggc
ggttacgaccagaagggcggggagatggcggaggagatccggccgttctgcgaggctggg
ctggtcaatgccatcggcggctgctgcggcacgggtccggagcacatcgcggccattaag
gcgatggcgtctgcgtacccgcctcgcaaaccgccggcgactgagccgctgatgcgtatc
agtggcttggagccactgaactacaacccagaccctgccaacatgcgccggaccttcctc
aatatcggggagcggtgcaacgtggcgggcagcatcctgttcaagaaggccatcatcaac
aacgattacgaaaaggccgtggccatcgcgctgcagcaggttcagcagggtgcggacgta
ttggatattaacatggacgacggcctgatcgacggggttgcggctatgacccgtttcgtg
aacctgctggtcagcgaccctgagatcagccgggttccgttcatgattgacagcagcaag
ttccatattgtggaggccggtttgaagtgcagccagggcaagtgcatcgttaacagcatc
agcttgaaggagggcgaggaggcattctgcaagcaggcggagatcgtgaagcgtcacggc
gctgctgtagtggtcatggctttcgatgagcagggccaggcagccggctatgccgacaag
gtccggatctgctgccgtgcgtacaagctcctggtagagcaggtgggcttcaacccgcag
gatattattttcgaccccaatatcctcaccgtcggcacgggcctgccggagcacaacaac
tatgcggtggactttatccgcgcaacccgcgaaatcaagcgactgtgcccgggcgccaag
atcagcggcggcgtcagcaacatcgcgttcagcttccgcggaaacgaggcggtccgtcgc
gccttccacagcgccttcctgcagcatgcttgcgctgctggcatggatatgggcattgtc
aacgcggcacaggtgaaggaggacgcttacgacaagatcgacaaggagctgctggagttc
gtggaggatgtgctgcttaacaagtgcgagaatgcaacggagcgtatgctggaattcgct
gctctccttgagcccaaatgcaagcccacggcggtggtgaagaaaggtgcgactcaggga
gcggcgggcgctggtgccaagaaggaggagtcgtggagggatttgcccgtggagaagcgc
attgagtacgcgcttgtaaagggcattgatgagtttgcagtcgtggacaccgaggaagcg
aggacgtgtggcaggtatacgaagccgctgcatgtcattgagggcccactgatggacggc
atgaacgttgtcggcgaccttttcggtgcgggcaagatgttcctaccccaggtgattaag
tccgcacgcgtcatgaagaaggcggttggacacctcgtgcccttcatcgaggaggagaaa
cgtctgagcggcacggtcggcgaggactcgaatgcgggggtgtttgtgctggcaacggtg
aagggcgacgtgcatgacatcgggaagaacattgtgggcgtggtgcttggctgcaacaat
ttcaaggtgatcgacctgggtgtgatgacgccgtgggacgtcatcctagacgctgcggag
aagcataaggccaatattataggtttgtcgggcctcatcaccccttcgctggacgagatg
gttaccgtggccaagaagatggaggagcggggcctgaagacaccgttgctgatcggcggc
gcgactacatccaagatgcacaccgccgttaagatcgcacccgtgtacagcggccctgtg
gtgcacgtgctggacgcgtcgcgcagtgtgccggtttgccaggctttcgttgataagaac
ctgacacaacgacaggaatttatttcggaggtggccgagcagtacgcggagctgcgcgag
gaattttacgcgtccttggaggaccggaagtacttgagcttggcagaggcgcggaagcgg
gcctttgccgtggactggaaggacccgatcaacacgcctttcaagcccaaggtccttggg
aacacggtcttcacggagtaccccatagaggacgtactgccgtacattgactggaacccg
ttctttcaagtgtggcagctacgcggccgctacccaaaccgaggcttcccacgcatcttt
aacgacgccaccgttggtgcggaggctaagaagctgtacgaggaggcccaggttatgctg
aacgactttgtgaagaataaacgcgtgacgctcaaggctgtggtgggcttgtacccggca
gccgctgtgggtgatgacattgaggtgtacacggacgagtcgcgcagcagcgtcaaggcg
cggctggcagggttgcggcagcaggcggagaaggatggcgtggagccctattactgcatt
tcggattttgtggcccccaagggcagcggccttgaggactatgtcgggatgtttgcatgc
tcggcaggccacggcttggaggaggtgattgccggctttaaggccgccggggacgactac
agctacattatggcggaggcgctggcggaccgcctggcggaggcgctggcggagcggttg
cacgagctggtacgtcgcgattactggggctacgcggcggacgagcagatgagcgtggac
gacatgcttaaggtcaagtaccagggcatccgtcccgcaccgggttacccgtctcagccc
gaccacacagagaagctgaccatgtgggggctgctggacgcggaggccacaaccgacatc
aagctgaccgagtcgctggccatgtggccagcggcgagcgtcagcggcctctatttcggc
ggccgttgttcgtcgtactttgccgtcggtaagatcacgcgcgagcaggtggaagactat
gcggtgcgcaagaatatggacatcaaggatgcggaacgctggttggcaactatgcttaac
tacgagccatga
DBGET
integrated database retrieval system
