KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_87463
Entry
VOLCADRAFT_87463  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_87463
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VOLCADRAFT_87463
  Pre-60S particles
   Other pre-60S particles
    VOLCADRAFT_87463
SSDB
Motif
Pfam: HEAT_RRP12_N RRP12_HEAT
Other DBs
NCBI-GeneID: 9620093
NCBI-ProteinID: XP_002947270
JGI: 87463
UniProt: D8TLE4
LinkDB
Position
Unknown
AA seq 1528 aa
MASEYGDDADGGVAAEVTQRYGRSAQPESQQVVAVLQAVTDVIRNEGLPLSPTSYFAAIM
SALEQPSTQGSHQVVLAMLTLLAVVMPRLPNHVLRARFVGCSELVGSLLAAHHGDAATTK
AALGCLAQVLAAADPSAWIAAVPAFNQMLGFVADARPKVRKRAVEGLVETLASLQRSPAL
GAASELVLKGMWASLSFPWKTPFASPIAVCQRVLPGPAAAAHAAVAASNKQRAAAEEAIT
TAVADALHLIGALKGALPLLAPPTAKAVSDLLLKLYGLRQPLLDRHATEALAALAGASGP
GGVASTRLQSAGELSHLISVVTDTESLWVGSGRDPGLLTALGRLLEAGFSKLAEADPAAC
AARLPRAVHALVPQLVAEQDGVRYGTFEALRGLISDCLNPQVVAAAKMPRGVGSGAAGGP
TPLSSLVLAVAAALSARYQDAWGMALPVAGALVERLGELGVPDAAAPILECLGAIVAGAE
DVAAAAAGADEGGADGGGEGRLGGPVDASHSRAAEATLGTAIRALGPEVVLQVLPLQILE
GLTGTAEPRTWLLPLLRRHVRQARLGYWFKELLPLAQSLGGRAAALSAAGGAPAAALALK
CRTLELQIWHCLPAFISWATDLPDVYGTVVNTLAAAFNNRPDLHPPICQALQRACAQVRH
VLVADGRGPDLVGYADPAAHGPSGAAAGRGGGGGDDDDDDGGDGDAGEEPPVAAVHGGAP
PPGYGAAEAEAALTALRAFNKQWLSVLCKAFLNSEPEVRGPYAAAISAMSAVTDAGVVGG
YFRSALQKLSKIILDEAAPVPPADVVTDGGSDPTDRRNTFLELALWLSYGLPDTAVDVLF
KAVKTAVSYDQASVQKRGFKVLAVLAEAREPWLRTNLAEVLKQHLLGTGATSTLSAARRY
RLRLIRPVVVALQQPGVEVPSGILAAAAGGGGGEDQDMAGADDDDDDDDDDDGDGKRKRA
KAASPLAQRRQLAASLIAEIVMCTKEANKKTRSAAYDLLVGLAHVMDEQDPGRITGSDDE
GDDDAMEQDGGRGGKGGLYEFFTMVMAGLVASTPHMVSATVMALARLTYEFAAAMQNLVA
SLLPPVLSLLRGKAREVAKAVLGFVKVCAMRLPVDLLLPHLKPILEGMLVWAEDSKNKFK
LKVRVIVERLARRCGFDAVAEAMPPSDAKLLAHIRKEAAKRQRRKHEGGGSEAGSEAGDD
DRRSRRSGASSGRSSMARTARGSQWGHTAVFSSEEGGSDGGGGRGGGAKSTKSGGGRGGA
ASVATGRGGSGVRLASGSGDPMDLLDVGASRQLVRSAAGARNAGASARAGDDFKRDPASG
KIVIKDDDEDGGDDDPLGLGRRGGKKRRRAGDADGYDSDDSDYDDLKGVADLKYALKKAG
DSRSVRFAEAAKSLAGARSAAARSSGGRSSASAGGRSEGGRSSGAPGGGPRGRQDGKGGK
GAHSGERFKAKNASGDVKGKAKVEPYAYWSLDRRMLNRRRGKQAAASSKLTSVISGAKAG
AAKGAKAKRQAAAAREVKRQRTGPNDME
NT seq 4587 nt   +upstreamnt  +downstreamnt
atggcatctgaatacggcgatgacgctgacggcggcgtggcagccgaagttacgcaacga
tatggtcgctcagcgcagcccgaatcgcagcaagttgttgcagtgctgcaggcagtcacg
gatgttattcgaaatgagggtttgccgctcagtccaactagctacttcgccgccatcatg
tcggccctagaacagcctagtacacaaggttcgcaccaggtggtattggctatgttaacg
ctgttggcggtggtaatgccacggctgcccaaccatgtgctgcgtgcccgctttgtgggt
tgctcggagctggtgggttcgctgctagccgctcaccacggcgacgcagcaacaacaaag
gcggcgctgggctgcctggcgcaggttttggcagccgcggatccgtccgcttggatagct
gcagtaccggccttcaatcagatgctgggctttgttgccgacgcgcgtcccaaggttcgc
aagcgggcggtggaggggcttgtggagaccctggcgagtctgcagaggagtccggcgctg
ggggcagccagcgagctggtgctcaagggtatgtgggcctccttgtcgttcccttggaaa
acccctttcgcttctcccattgcagtttgccagcgggtgcttccagggccagctgccgcc
gcacacgccgccgtcgccgcgtccaacaagcagcgggccgcggccgaggaggccatcacc
actgcggtggcggatgcgctgcacctgatcggggcactgaagggggcgctgccgctgctg
gcgccgcccactgccaaggctgtctctgacctccttttgaagctgtacggcctccgtcag
cccctgctggaccgccacgccacggaggccctggcggccctggcgggagcctcgggtccc
gggggagtcgcctcgacccgcctgcagtcggccggggagctgtcccacctgatctcggtg
gttactgatacggagtcgctgtgggtgggcagtggccgggacccggggttgctcacggcg
ctgggaaggctgctggaggccgggttttccaagttggccgaggcggatcccgcggcgtgt
gcagcgcgcctgccacgtgccgtacacgcgctggtgccgcagctggtagcggagcaggat
ggcgttcggtacggcacctttgaggctcttcgcggcctgatctcggactgcctcaacccg
caagtggttgcggccgccaagatgcctcgcggggtggggtccggcgctgctggcggccct
acgccgctgtcctccctggtattggcggtcgcagcggcgctatcagctaggtaccaggat
gcatggggcatggcgttgccggtggctggagctctggtggagaggttgggtgagctgggg
gtgcctgacgccgccgcaccgatcctggagtgtctgggggccatagttgcgggcgcagaa
gacgtcgccgctgccgccgccggtgcggacgaggggggtgccgacggtggcggcgagggc
cgtctgggggggcctgtggatgcttcccattcgcgcgcggcggaggcgacgctgggtacg
gcgattcgggcgctgggtccggaggtcgtgctccaggtgctcccgctgcagatcctggag
ggcttgacgggtacggcagagccgcggacctggctattgccgctgctgcggcggcatgta
cgacaagctcggctgggctactggttcaaggagctgctgcccctggcccagtccctgggt
ggccgggcagctgcgctgtccgctgccgggggcgcacccgcagccgcgctggcgctcaag
tgccgaacgttggagctgcagatctggcactgcctgcccgcctttataagttgggccacc
gacctgccggacgtgtacggcaccgtggtcaacactttagctgcggccttcaacaaccgc
cccgacctgcacccacctatttgtcaggcgctgcagagggcttgtgcacaggtacggcac
gtgctcgtggctgacgggcgcggcccggatttggtgggttatgctgatccagcggctcac
gggcctagcggcgccgccgccggccggggtggcggcggcggcgatgatgatgacgatgat
ggcggcgacggtgacgctggagaggaaccccccgtggcggcggtgcacggcggcgcgccg
ccgccggggtacggcgctgcggaggcggaggcagcattgacggcgctacgcgccttcaac
aagcagtggctatcggttttgtgtaaggcctttctgaactcagagcccgaggttcgaggg
ccttatgcggccgccatttcggccatgtcagctgtgacggatgcgggcgtggtgggcgga
tacttccgatctgccctccagaagctatccaagatcattctggacgaagctgccccggtg
ccgcctgctgacgtggtcacggacggcggctccgacccgacggaccgccgcaacaccttt
ttggagctggcgttgtggctcagctacggcttgccggacaccgctgtggatgtgctgttc
aaggccgtcaagacagcagtatcgtacgaccaggcctccgtacagaagcgcggattcaag
gtgttggcagtgttggcagaggcgagggagccctggttgcggaccaacctggcggaggtg
cttaagcagcacttgctaggcaccggagcgacctccacattgtccgcagctcgccgctat
cggttgcgactcattcgaccggtcgttgtggcgttgcagcagccgggagtggaggttccg
tcagggatactggcagcagcggcagggggtggtggtggtgaggatcaggatatggcgggg
gcggacgatgatgacgacgacgatgatgatgatgatggcgatggcaagaggaagagggca
aaggcggcttcgccgctggcgcagcggcggcagttggcggcgtcgttgattgccgagatt
gtcatgtgcactaaggaggccaacaaaaagacgcgctcggccgcgtacgacttgctggtt
ggcctggcgcacgtgatggacgagcaagatcccggccggatcacgggcagcgatgatgag
ggcgatgatgacgccatggagcaggacggtggcaggggaggcaagggagggctgtatgag
ttcttcacgatggtgatggctggtctggtggcctccaccccccacatggtatccgccacg
gtgatggccctggctcgactcacgtacgagtttgcggcggccatgcagaacttggtggcc
tcgttgctgcccccggtgctgtcactgctgcggggcaaggcaagggaggtggccaaggcg
gtgctgggcttcgtcaaggtgtgcgcgatgcgtcttcccgtggatctgctgctgccccat
ctgaagcccatcctggagggcatgttggtgtgggcggaggactcgaagaacaagttcaag
cttaaggtccgtgtcatcgtggagcgactggctcgccgttgtggcttcgatgcggtggct
gaggctatgcccccctcggacgccaagctgttggcgcacatccgcaaagaggccgccaag
agacagcgccggaagcatgaaggaggcggcagcgaggcgggcagcgaggcgggcgacgat
gaccggcgatctcgccgcagcggtgccagcagcggccgcagctctatggcccgcaccgcc
cggggctctcagtggggccacacggccgtattctcctccgaggaaggaggaagtgacggc
ggtggcggcagaggcggaggcgcaaagagtaccaaaagcggagggggacgtggcggcgcg
gcgtcagtggcgacgggtcgcggcggcagcggtgtacggctggccagcggcagcggcgac
ccgatggatttgctggatgtgggggcatcccgccagctggttcgcagtgcggcaggtgcg
cggaatgcaggtgcatccgcccgggctggcgatgacttcaaacgcgacccggcctcgggc
aagatcgtgatcaaggatgatgatgaggatggcggagatgacgacccgctgggactgggg
cgccgcggcgggaagaagcgccgacgcgccggcgacgccgacgggtacgacagtgacgac
tcggactacgatgacctgaagggtgttgcggacctcaagtatgccctgaagaaggccggg
gactcgcgatccgtgcgcttcgcggaggccgccaagtcgctggctggggcccggtccgcg
gcggcacgcagctccggcggtcgctcctccgccagcgctggcggtcggtctgagggcggc
aggtccagcggggcccctggaggggggcctcgcgggcggcaggacggcaagggcggcaag
ggcgcacacagcggcgagaggttcaaggccaagaatgcatcgggagatgttaaaggcaag
gccaaggtggagccatacgcgtactggagcctggaccggcgcatgctcaaccgccgccgg
ggcaagcaggccgccgcgtcgagcaagcttacgtccgtcatttctggtgccaaggcgggt
gctgccaagggcgccaaggctaagcgccaagcggccgctgcacgggaggtgaagcggcag
cgtactggcccgaacgacatggagtaa

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