Volvox carteri f. nagariensis: VOLCADRAFT_87471
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Entry
VOLCADRAFT_87471 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VOLCADRAFT_87471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_87471
Membrane trafficking [BR:
vcn04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
VOLCADRAFT_87471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
9620237
NCBI-ProteinID:
XP_002947274
JGI:
87471
UniProt:
D8TLF1
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MGLWVLSCTLASSPGPGHSCSRSSLLGLKPLGVLRRRLWHSLALLTGGPLVLGVEAQGAT
AGMFYLQEEDRNEPSKYDDAFRDLRAEIFKHHGPGTRNVEAAINQIVEDATQCKFESTNN
SSDEIVLLNIVQVLGQALESPAGRYLTDESICKAVQAAFMLGDPVKKPKEYGDIMGYYSR
QTCGAMIRTVFKNVAEQLQAAQEAEMEHQPVPEPTCRYGVRAAMNILEFLIDLIHKGPSL
QGATKETVEEMVVFSLDTIHSIICVAGSALVLAEPLARLVQVELLHAMCQAVVQNPSIAV
ITGFCQTLLCVSTYLGHVSMAQLETVIQRVLLRLADGKGVPGLEQQEAALEGLLDLVRQP
NFVHDMFVNCDCRLERANLFEEVCSLISKTAFPVSKTSVGPLNFISLEALLAVLGALAQS
ARNGQELLAAPAAASELPFYVDLWGPLVAGQHPDFSLLADVLLAPHPYTHHHHHLHHGHG
HHGTQLGVSRQSSAATPGPALPPPESAAAAAAGGGVLSAAEAAAAEASAALRSAGSEASS
SSPAGSQGPQRATSSGLPPGSGAGVRGVPVTGPLQLRCAMAERCLKARIGLAVDHFNKDF
KKGFAAMQTARLLPENPPAGDSEEAKVEARKVLATRLGQFLRTCPGLNKTTIGELLGDPD
PFYLQASAGRGQGAEATAAGLCFSGFQQGCPFPVLESYTIGFDFAHLKFDSALRMFLESF
RLPGEAQKIDRIINAFGRHYYASNEDVFREGDAAYVLAYSVIMLNTDQHNNQVKNKMTLE
SFKRNLRGVNAGTDFDGVFLEEIFTSIVKTPLRLSEPASMDISEQCFYQLAQISGTQRGL
VVPSEEGRHLFDTTMFRLIWGPAVHAMCAIVDNCSNESLVSSALEGLQMACQIAAAHELE
DVADSIIVNLSKIPLQHLAAVPTLSRADVMFGRDYKIRAVTSTLAIVINKHGDCLRGGWA
NVLDLVLHLYRKMLLPDSFCKALNGDVDGDGGLVVREVDSVSLKVRRHLLLRQGSNSTGA
SSIFKHISSSFTQILTLGSDLPQSESSVGRASRADGTQSSAVAAARADMDKADMQLSEVE
RAAVARAEECLTACCLEDAFTDSKFLKQESLVQLVRAICSSSGPIPRSNSSLGSYPWDVS
EVCLELLYTVLLRNRDRITLLWPRAYEHFQTILSHSRECEPVLVQKAIMAMLRLCQRLLP
YKAADISEPLMRGIQLLSLVDEQVANDLASTIASEIQSLLQGAAAYLTSTQAWMSICTLI
KVIHLDPPSFPVCLDTITWVCNETLSMINFTAVVPTAVDLLERAVADPRSGEWKGHPAHI
GQAIRVVTSVEEWLELWWISSQAKHSPEALEGLGFTAFKLDSWHLLLGWLCRLAKNHNVE
VRSGTLQCLQRAVVSAEKLAIPAEGLTRALQELLLPLGQDLVKMLGSSAARSMPQCDVTV
RELVRALSKMVLLFHAQLSSLPTFGRVWRGILDVMAVAAAANNRMNGEVLAEALPEAAKN
MLLVMHSNKILVEGWKDQDGTDLWDYTWRQIAKAAPGVTLQSLTGHGAAARAAAAAGDNG
GQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgggtttatgggtcttgagctgcacccttgcttcgtctccgggtcccgggcattcttgc
tctcgaagctccctacttgggttgaagcccctgggagtcctgcgtcggcgcctgtggcat
tcgcttgcgctgctgaccggaggaccgcttgtacttggcgtagaagcccaaggcgcgaca
gcgggcatgttctacctgcaggaggaggacagaaatgaacccagcaaatatgatgatgcc
tttcgggatctacgggcggagatttttaagcatcacggtcctggcacccgcaatgtcgag
gcggcgataaaccaaatcgtcgaggatgcgacgcaatgcaagtttgagtcgacgaacaac
tcttcagacgaaatagtcctcctgaacattgtccaggtcctcggccaggccttggagagc
cccgcggggcgctatctgacggacgagtcgatatgcaaggcggtacaggccgcgtttatg
cttggggaccctgtcaagaaaccaaaggagtatggagacatcatgggctactattcgcgt
cagacttgcggtgccatgatccgcactgtgtttaagaacgtggcagagcagctgcaggca
gcacaagaggcggagatggagcaccaaccggttccggagccaacctgtcggtacggcgtc
cgggcggccatgaacatcctggagttccttatcgacctcatccataagggtccatcgctc
cagggtgccacaaaggagacggtggaagaaatggtggtgttttctctggacactatccat
tccatcatctgtgtagcgggtagcgcactggtgctggctgagcccctggcgcggctggtg
caggtggagctcttacatgccatgtgccaggctgtggttcaaaaccctagcattgctgtc
atcacgggcttttgccagacgcttctttgtgtgtccacctacctgggccacgttagcatg
gcgcagctggagacggtgatccagcgggtgctgctgcggctggccgacggcaagggcgtg
ccggggctcgagcagcaggaggcagctttggaaggactgttggaccttgttcggcaaccc
aacttcgtacatgatatgtttgtcaactgtgactgccgcctggagcgagcaaacctgttc
gaggaggtctgttcgctgatctcaaagacggccttcccggtttccaaaacaagcgttggg
ccactcaacttcatcagtctggaggcgctgttggcggtactaggggctcttgcgcagagt
gctcgcaacggacaggagctgctggccgcgcccgccgccgccagcgagctgcccttctat
gttgatctgtggggtccgctggttgctgggcagcacccggacttttccctcttggcggat
gtcttgctggcaccgcacccttacacccaccaccatcaccacctgcaccacggtcatggg
caccacgggacgcagctaggcgtgtcgcggcagtcgtccgcggcgacgccagggccggca
ttgccgcctccggagtccgcagcggcggcagcggcgggtggtggcgtgctgagcgcagcg
gaggctgcggcagcggaggcgtcggcggccttgcggtcggcggggtcggaggcgtcatcg
tcgtcgccggctgggtctcaaggcccgcagcgggctaccagcagcggcctcccacccggc
tcgggcgcgggtgtccgcggggtgccggtgacggggcccttgcagctacggtgcgccatg
gcggagcgctgcctcaaagcacggataggcctcgccgtggaccattttaacaaagacttc
aagaagggctttgccgccatgcagaccgcccggctgctgcccgagaacccacccgccggt
gacagcgaggaagccaaggttgaggcgcgcaaagtgctggccacgcggctgggccagttc
ctgcgcacctgcccaggcctcaacaagaccaccattggggagctgctgggagaccccgac
ccgttttacctgcaggcgagtgccggccgtgggcagggggctgaggctaccgctgcggga
ctttgtttcagcgggtttcagcagggatgccccttccctgtccttgagtcctacaccatc
ggatttgacttcgcgcacctaaagttcgactcagcgttgcgaatgttcctggagagcttc
agactgccgggcgaggcccagaagattgaccgcatcatcaacgccttcggtcgccactac
tacgccagcaacgaggacgtgttccgcgaaggtgatgctgcgtacgtgctcgcgtactcg
gtcatcatgctcaacacggaccagcacaacaaccaggtcaagaacaagatgacgctcgag
tcgttcaaacgcaacctgcgtggcgtcaacgccgggacggactttgacggggtttttttg
gaggagatcttcacctcaatcgtcaagacgccgttgcggctgtcggagcctgcttctatg
gacatcagcgagcagtgcttttaccagctggcgcagattagcggcactcagcgggggctg
gtggtgccgtcggaggagggccggcatctgttcgacaccacaatgtttcggcttatctgg
ggccccgccgtacacgccatgtgcgccattgtggataactgctcgaatgagtcgctcgta
tcgtcggcactggaggggttacagatggcctgccaaatcgcggcagcgcacgagttagag
gatgtggcagactcgattattgtcaacctgtccaagattcccttgcagcatctggcagcg
gtgcccacattgtcccgcgcggatgtcatgtttggccgtgactacaagatacgggcggtg
acgagcaccctagctatcgtgatcaacaagcacggcgactgccttcgcggtggctgggca
aacgtgttggacctggtgctgcacctctaccgcaagatgctgctgccagacagcttctgc
aaggcactcaacggtgatgtggacggcgatggcgggttggtggttcgggaggtggatagc
gtgtcgctcaaggtgcggcggcacctgctgttgcggcagggctctaactccaccggtgca
tcgtccattttcaagcatatatccagcagcttcacgcagatcttaactctgggcagtgac
ctcccccaatccgagtcgtcggtcggacgcgcctcacgcgctgacggcacgcaaagctct
gccgtggccgcggcacgggcggacatggacaaggcggatatgcagcttagcgaggtggag
cgggcggccgtggctcgggccgaggagtgcctcacggcatgctgcttggaggacgccttt
acggatagcaagttcttgaagcaagagtctctggtgcagctggttcgcgccatctgctcc
agctctgggcctatcccacgctccaactcttctttgggcagctatccctgggacgtgtcg
gaggtgtgtctggagctgctctacacggtcttgctccggaaccgggaccggatcacgctg
ctgtggccgcgcgcctatgaacatttccagaccatcttgagccactctcgcgagtgcgag
ccggtgcttgtgcagaaggccatcatggccatgctgcggctttgccagcgcctgctgccg
tacaaggcggcggatattagcgagccgctcatgcggggcatacagctgctgtcgctggtc
gatgagcaggtggctaacgacctggcgtccaccattgcctcggagatccaatcactgttg
cagggcgctgccgcctacctgacgagcactcaggcctggatgagcatctgcacgctgatc
aaggtcatccacttggacccaccctcctttccggtgtgcctggacacaatcacatgggtt
tgcaatgagacgctgtccatgatcaacttcacggcggtggtgcccacggcggtggacttg
ttggagagggcagtggccgacccgcgcagcggggagtggaagggccacccagcgcacatt
ggccaagccatccgggtcgtcacgtctgtagaggaatggttggagctgtggtggatttcc
tctcaagccaagcactccccggaggcgctcgagggactgggcttcaccgccttcaagctg
gactcgtggcacttgctcttaggctggttgtgccgcctggcgaagaaccacaatgtagag
gtccgtagcggtaccctgcaatgtctccagcgtgccgtggtgtcggcggagaagctggcc
atccccgcggagggcctcacgcgcgcgctgcaggagctgctgctgccgctgggccaggac
ttggtcaagatgctggggtcctcggcggccaggagcatgccgcagtgcgatgtgactgtg
cgtgagctggtacgcgcgctctccaagatggtgctgctgttccatgcgcagttgtcaagc
ctcccaacgttcggtcgcgtgtggcggggtatcttggatgtgatggcggttgcggccgca
gcaaacaaccgcatgaacggcgaggtgctggcggaggcgctacctgaggctgccaagaat
atgctgctcgtgatgcacagtaataaaatcctggtagagggctggaaggaccaggacggc
accgacctgtgggactacacgtggaggcaaatcgccaaggcagcacccggggtcacgttg
cagtcgctgacgggacacggggcggcagcgcgggcggcggcagcggccggggacaacggg
gggcaatga
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integrated database retrieval system