Volvox carteri f. nagariensis: VOLCADRAFT_87629
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Entry
VOLCADRAFT_87629 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14573
nucleolar protein 4
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VOLCADRAFT_87629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_87629
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VOLCADRAFT_87629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF6338
DUF6541
TgpA_N
FtsK_4TM
Motif
Other DBs
NCBI-GeneID:
9620307
NCBI-ProteinID:
XP_002947476
JGI:
87629
UniProt:
D8TLU3
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MAAKDLRTVFIRGVSFDANEKDLEALFSDVGPVKQCFLVRVKGQPKHRGFGFVQYSLPED
AERAVTEYNGKSLKGRKLQVELADKRAPLEERKKKRKLGQDCGDDGGNVAPGAAAGGSAP
HPALPGATYPAAEASTAEKKPRGKDPASAAADVGQPDGGAVPVTAAATQPPRKRQRADGA
AAAAATAASAAEKHKFLRAVAVGNLTPQSIPQAIALARRVAPVESVMNPAPADIVQQAKL
EGDGCSGSVVIVVYKTVKDAMHAVTQLHNKTLELRNGAGGGGGGGGGKKGSQKGRKGQQQ
QVEEDGDGDGGDQQQQQQQQRLTTLWARGVKGEGAHVKQWRVIVRNLPFKATEAALLEAL
TPAGFVWELRLPRGPDGRLKGFAFAAFTILWAAWWWLTGRCPRLNTSRPEGRRRRRRRAV
AVLVLVLVLAAIAAMLNPKIQIGLHPLRRCTRSDRVLRPRMYVRLCACMYGVSWIYVSYA
GSEDPGDEEGEGEGEEGQEVEEEDGGVDGEEDEDEEDEEEEIGFSSDDDDDDEVDDDDDD
DDDDGEAEAEVRDSEEEEEDDEDEGEEEEEEEEEVLDEEELAASQERGMISNVQRAVRDE
HEDGQQQQQQGMQQGAAADQMNNRIKGRKDTAPANAAATSGKGTAAAAAAPQREEQERPP
KRQTWQGEEAEDPDADDGEARPTTGPSKASASSLSTTVFVRGLPLDATKEQLQARLELFG
PVKACRLVMDKASGKPKGTAFVEFREEEAAGRAAAACSRGRRNEGPGITLSGRQLDVDLA
VSGEDARKIATDRVASKAASKDRRNLYLAKEGHITEGSPAWNGMARRKRAAEEKNTKLRS
PNFVISRTRLSVRNIPPNWTEGQLRKMFAEAVRQRATKENPRVVQVPFTGPIANTVGCLL
EFGGEGLGFLLDIKKKANGVCSAPWKEECVFRVKAKILREQDRYDASGARKSKGLGFVEF
ESHDHALAALRQLNNNPGTPWGRERRPIVEFAIDNVKVLKKIEHLREKTKARQQQQQGQQ
ENGDMANGGGGRSDRSGSRGKKGLEGKGAPARAGVVEEEEEGGADTQPTVAADKKGKKGK
KAKTTGAARGEEEEAEEEADADGGAGGDGTALSQRQRKRQRQKERVERKKALLKEGGVQA
LVEAVEVDRKQRQQAGDGWAYGGGAAVGGGGGKGQTAKGSQPRKVTPSQQQQQQRHQPQQ
RKRKAEEEDLDRIAREGLAAEAAARGGDAAAKRRRRGGKVAGEEGEGGGDRLDRLVEQYR
AKLSGERPKTKISDSNSNASKAGGRGGGRGGKKGGPKGSGKGDTAKAAKGSGAKAGGGRG
DGSSGNVAALVAGAASGGLRRWFDG
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaaagacttgcgcaccgtgtttataagaggagtcagtttcgacgcaaacgag
aaagatctcgaagcgcttttttctgatgtcgggccggtgaagcaatgtttcctcgtccgg
gtgaagggccagccgaagcatcgcggcttcggcttcgtccagtactccttgccggaagac
gccgagcgcgctgtcacagaatacaatggaaagagcttgaagggaagaaagcttcaggtc
gagcttgctgataagcgtgcgccgttggaggaacgcaaaaagaagcgaaagcttggtcag
gattgcggcgacgatgggggaaatgtcgcccccggtgccgccgccggcggctcagcgcct
catccggcacttcctggcgcgacatatcccgctgctgaagcctctaccgctgaaaagaaa
cccagaggcaaggacccggcgtcagcggcggcggacgtcgggcagcccgacggcggcgcg
gtgccggtaaccgcagcggcgacgcagccgccccggaagcggcagcgcgctgacggcgcc
gctgccgccgccgctaccgccgcgtcagcggctgaaaagcacaaatttctacgggcggtt
gctgtgggcaacttgacgccgcagtccatacctcaggccatagcgctagctcgacgggtg
gcgcccgtggagtctgttatgaacccagcgcccgcggacatcgtacagcaagcgaagctg
gagggtgatggctgtagcggcagtgtcgtcattgtcgtgtataagacggtaaaggacgcc
atgcatgcggtcactcagcttcacaacaaaaccctggagctacggaacggggctggtggc
ggcggaggcggaggcggagggaaaaaagggtcgcagaagggccgcaaggggcagcagcag
caggtcgaggaggacggggacggcgacggtggagaccaacaacaacagcagcagcagcag
cgcctcaccacactctgggcccgcggggtgaagggcgagggggctcacgtgaagcagtgg
agagtcatcgtaaggaacctgcccttcaaggcgactgaggcggctctgctggaggcgctg
acacccgcgggcttcgtttgggagctcaggttgcccaggggtccggatggccgtctgaag
ggtttcgccttcgctgccttcacgattttatgggccgcatggtggtggttgactgggcgg
tgtccaagactcaatacctccaggccggagggaagaagacggaggaggaggagggcggtg
gcggtgctggtgctggtgctggtgctggcggcgatcgcggcgatgttgaatccgaagatc
cagatcggcctacatccgctccgacgctgtacgcgctctgaccgtgttctgaggccccgt
atgtatgtacgtttgtgtgcatgtatgtacggtgtttcgtggatctatgtgtcgtacgca
ggatcggaggacccgggcgacgaggagggggaaggggagggggaggagggccaggaggtc
gaagaggaggacggtggcgtggatggtgaggaggacgaggacgaggaggatgaggaggaa
gagattgggtttagcagcgatgacgatgacgatgacgaggtagatgatgatgatgatgat
gatgatgatgacggggaagcggaagcggaagtgcgggacagtgaggaggaggaagaggac
gacgaagatgagggcgaagaggaggaggaagaggaggaagaggtgttggacgaggaagag
ctggcggccagccaggagcgtggcatgatcagcaatgtacagcgtgccgtacgggacgag
cacgaggatgggcagcaacagcagcagcagggcatgcaacaaggggccgcagccgaccaa
atgaacaaccgaatcaagggccgaaaagacacggcccccgccaacgccgcggccacatct
ggtaagggtactgctgctgctgctgctgcgccgcaaagggaggagcaagagcggcctccg
aaacgtcaaacgtggcaaggagaggaggcggaggacccagacgccgatgacggcgaagca
cggcccacgacgggtccatccaaggcttccgcgtcgtccctcagtacgacagtattcgta
cggggtttacccttggacgccaccaaagagcaactgcaggcgcgtctggaactttttgga
cctgtcaaggcctgcaggttggttatggataaggcctccggtaagcccaagggtacggca
ttcgtggagttccgggaggaggaggcggcgggcagggcggcggcagcttgctctcgcggc
cgtcgcaacgagggacctggcattacgttgtcaggtcgacagttggatgttgatctggcg
gttagcggggaggatgccaggaagatagcgactgaccgagtggcctctaaggccgcttct
aaggaccgtcgtaacctctacctggccaaggaggggcacattacggagggctcccccgcc
tggaacggcatggccaggcgcaagcgagccgcggaggagaaaaacacgaaactccggtcg
cccaatttcgtcatcagtcgtacacgtctgtcagtgcgaaacatcccgccaaactggacg
gaagggcagctgaggaagatgtttgcggaggctgtacgacagagggccacgaaggagaat
ccgcgtgtcgtacaggtgccgttcacggggccgattgctaacactgtgggatgcctgttg
gagtttgggggggaaggtcttgggtttttgctagacataaagaaaaaggcgaacggggta
tgcagtgctccgtggaaggaggagtgtgtttttcgcgtgaaggccaagattctacgggag
caggacaggtacgacgcctccggcgcccgtaaatcgaagggtttgggttttgttgagttt
gagagccacgaccacgccctcgcggctctccgtcagctgaacaacaacccagggactccg
tggggccgggagcggagacccatcgtggagtttgcaatcgacaacgttaaggttctcaag
aagatcgagcacttgagggaaaagaccaaggcccggcagcagcagcagcaggggcagcag
gagaacggagacatggccaacggcggcggcggaagaagcgacagaagcggcagcagagga
aaaaagggtctcgaaggaaagggggcgccggctcgtgccggggtggtggaggaggaggag
gaggggggggcggatacacagccgacggtagcggcggacaagaagggcaagaagggcaag
aaggcaaagactacgggggcggccagaggggaggaggaggaagcggaggaggaggcggac
gctgacggcggcgcgggtggggacggtacggcactatcgcagcggcagcggaaacgccag
cggcagaaggagcgcgtggagcgcaagaaggcgctgctcaaggagggcggcgtgcaggcg
ctcgtggaggcggtggaggtggaccggaaacagcgccagcaggcgggtgatgggtgggcg
tatggtggtggtgctgctgtcggaggaggtggagggaaaggccagactgccaaagggagc
cagcccaggaaagtgaccccgtcccagcagcagcagcagcagcggcaccaaccgcagcag
cggaagcggaaggctgaagaagaggatctcgatcgcatcgcgcgagaaggcctggcggcg
gaggcggcggcgcgagggggtgatgccgccgccaagcgccggcgacgtggtggcaaggtc
gcgggtgaggagggcgagggcggcggcgaccgcttagatcgcttggtggaacaataccgc
gcaaagctgtcgggcgagcggcccaagacgaaaatttcagattcaaattcaaatgcctcg
aaagcgggcggcagaggaggcggtagggggggaaaaaaaggcggccccaaaggcagcggc
aaaggcgacacggcaaaggcggcaaagggttccggagccaaggccggcggtggcaggggc
gatgggagctctggaaatgtggccgcgttggttgcgggagcggcgtctgggggcctgcgc
cgctggttcgatgggtaa
DBGET
integrated database retrieval system