KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_87629
Entry
VOLCADRAFT_87629  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14573  nucleolar protein 4
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VOLCADRAFT_87629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_87629
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    VOLCADRAFT_87629
SSDB
Motif
Pfam: RRM_1 RRM_7 DUF6338 DUF6541 TgpA_N FtsK_4TM
Other DBs
NCBI-GeneID: 9620307
NCBI-ProteinID: XP_002947476
JGI: 87629
UniProt: D8TLU3
LinkDB
Position
Unknown
AA seq 1345 aa
MAAKDLRTVFIRGVSFDANEKDLEALFSDVGPVKQCFLVRVKGQPKHRGFGFVQYSLPED
AERAVTEYNGKSLKGRKLQVELADKRAPLEERKKKRKLGQDCGDDGGNVAPGAAAGGSAP
HPALPGATYPAAEASTAEKKPRGKDPASAAADVGQPDGGAVPVTAAATQPPRKRQRADGA
AAAAATAASAAEKHKFLRAVAVGNLTPQSIPQAIALARRVAPVESVMNPAPADIVQQAKL
EGDGCSGSVVIVVYKTVKDAMHAVTQLHNKTLELRNGAGGGGGGGGGKKGSQKGRKGQQQ
QVEEDGDGDGGDQQQQQQQQRLTTLWARGVKGEGAHVKQWRVIVRNLPFKATEAALLEAL
TPAGFVWELRLPRGPDGRLKGFAFAAFTILWAAWWWLTGRCPRLNTSRPEGRRRRRRRAV
AVLVLVLVLAAIAAMLNPKIQIGLHPLRRCTRSDRVLRPRMYVRLCACMYGVSWIYVSYA
GSEDPGDEEGEGEGEEGQEVEEEDGGVDGEEDEDEEDEEEEIGFSSDDDDDDEVDDDDDD
DDDDGEAEAEVRDSEEEEEDDEDEGEEEEEEEEEVLDEEELAASQERGMISNVQRAVRDE
HEDGQQQQQQGMQQGAAADQMNNRIKGRKDTAPANAAATSGKGTAAAAAAPQREEQERPP
KRQTWQGEEAEDPDADDGEARPTTGPSKASASSLSTTVFVRGLPLDATKEQLQARLELFG
PVKACRLVMDKASGKPKGTAFVEFREEEAAGRAAAACSRGRRNEGPGITLSGRQLDVDLA
VSGEDARKIATDRVASKAASKDRRNLYLAKEGHITEGSPAWNGMARRKRAAEEKNTKLRS
PNFVISRTRLSVRNIPPNWTEGQLRKMFAEAVRQRATKENPRVVQVPFTGPIANTVGCLL
EFGGEGLGFLLDIKKKANGVCSAPWKEECVFRVKAKILREQDRYDASGARKSKGLGFVEF
ESHDHALAALRQLNNNPGTPWGRERRPIVEFAIDNVKVLKKIEHLREKTKARQQQQQGQQ
ENGDMANGGGGRSDRSGSRGKKGLEGKGAPARAGVVEEEEEGGADTQPTVAADKKGKKGK
KAKTTGAARGEEEEAEEEADADGGAGGDGTALSQRQRKRQRQKERVERKKALLKEGGVQA
LVEAVEVDRKQRQQAGDGWAYGGGAAVGGGGGKGQTAKGSQPRKVTPSQQQQQQRHQPQQ
RKRKAEEEDLDRIAREGLAAEAAARGGDAAAKRRRRGGKVAGEEGEGGGDRLDRLVEQYR
AKLSGERPKTKISDSNSNASKAGGRGGGRGGKKGGPKGSGKGDTAKAAKGSGAKAGGGRG
DGSSGNVAALVAGAASGGLRRWFDG
NT seq 4038 nt   +upstreamnt  +downstreamnt
atggcggcgaaagacttgcgcaccgtgtttataagaggagtcagtttcgacgcaaacgag
aaagatctcgaagcgcttttttctgatgtcgggccggtgaagcaatgtttcctcgtccgg
gtgaagggccagccgaagcatcgcggcttcggcttcgtccagtactccttgccggaagac
gccgagcgcgctgtcacagaatacaatggaaagagcttgaagggaagaaagcttcaggtc
gagcttgctgataagcgtgcgccgttggaggaacgcaaaaagaagcgaaagcttggtcag
gattgcggcgacgatgggggaaatgtcgcccccggtgccgccgccggcggctcagcgcct
catccggcacttcctggcgcgacatatcccgctgctgaagcctctaccgctgaaaagaaa
cccagaggcaaggacccggcgtcagcggcggcggacgtcgggcagcccgacggcggcgcg
gtgccggtaaccgcagcggcgacgcagccgccccggaagcggcagcgcgctgacggcgcc
gctgccgccgccgctaccgccgcgtcagcggctgaaaagcacaaatttctacgggcggtt
gctgtgggcaacttgacgccgcagtccatacctcaggccatagcgctagctcgacgggtg
gcgcccgtggagtctgttatgaacccagcgcccgcggacatcgtacagcaagcgaagctg
gagggtgatggctgtagcggcagtgtcgtcattgtcgtgtataagacggtaaaggacgcc
atgcatgcggtcactcagcttcacaacaaaaccctggagctacggaacggggctggtggc
ggcggaggcggaggcggagggaaaaaagggtcgcagaagggccgcaaggggcagcagcag
caggtcgaggaggacggggacggcgacggtggagaccaacaacaacagcagcagcagcag
cgcctcaccacactctgggcccgcggggtgaagggcgagggggctcacgtgaagcagtgg
agagtcatcgtaaggaacctgcccttcaaggcgactgaggcggctctgctggaggcgctg
acacccgcgggcttcgtttgggagctcaggttgcccaggggtccggatggccgtctgaag
ggtttcgccttcgctgccttcacgattttatgggccgcatggtggtggttgactgggcgg
tgtccaagactcaatacctccaggccggagggaagaagacggaggaggaggagggcggtg
gcggtgctggtgctggtgctggtgctggcggcgatcgcggcgatgttgaatccgaagatc
cagatcggcctacatccgctccgacgctgtacgcgctctgaccgtgttctgaggccccgt
atgtatgtacgtttgtgtgcatgtatgtacggtgtttcgtggatctatgtgtcgtacgca
ggatcggaggacccgggcgacgaggagggggaaggggagggggaggagggccaggaggtc
gaagaggaggacggtggcgtggatggtgaggaggacgaggacgaggaggatgaggaggaa
gagattgggtttagcagcgatgacgatgacgatgacgaggtagatgatgatgatgatgat
gatgatgatgacggggaagcggaagcggaagtgcgggacagtgaggaggaggaagaggac
gacgaagatgagggcgaagaggaggaggaagaggaggaagaggtgttggacgaggaagag
ctggcggccagccaggagcgtggcatgatcagcaatgtacagcgtgccgtacgggacgag
cacgaggatgggcagcaacagcagcagcagggcatgcaacaaggggccgcagccgaccaa
atgaacaaccgaatcaagggccgaaaagacacggcccccgccaacgccgcggccacatct
ggtaagggtactgctgctgctgctgctgcgccgcaaagggaggagcaagagcggcctccg
aaacgtcaaacgtggcaaggagaggaggcggaggacccagacgccgatgacggcgaagca
cggcccacgacgggtccatccaaggcttccgcgtcgtccctcagtacgacagtattcgta
cggggtttacccttggacgccaccaaagagcaactgcaggcgcgtctggaactttttgga
cctgtcaaggcctgcaggttggttatggataaggcctccggtaagcccaagggtacggca
ttcgtggagttccgggaggaggaggcggcgggcagggcggcggcagcttgctctcgcggc
cgtcgcaacgagggacctggcattacgttgtcaggtcgacagttggatgttgatctggcg
gttagcggggaggatgccaggaagatagcgactgaccgagtggcctctaaggccgcttct
aaggaccgtcgtaacctctacctggccaaggaggggcacattacggagggctcccccgcc
tggaacggcatggccaggcgcaagcgagccgcggaggagaaaaacacgaaactccggtcg
cccaatttcgtcatcagtcgtacacgtctgtcagtgcgaaacatcccgccaaactggacg
gaagggcagctgaggaagatgtttgcggaggctgtacgacagagggccacgaaggagaat
ccgcgtgtcgtacaggtgccgttcacggggccgattgctaacactgtgggatgcctgttg
gagtttgggggggaaggtcttgggtttttgctagacataaagaaaaaggcgaacggggta
tgcagtgctccgtggaaggaggagtgtgtttttcgcgtgaaggccaagattctacgggag
caggacaggtacgacgcctccggcgcccgtaaatcgaagggtttgggttttgttgagttt
gagagccacgaccacgccctcgcggctctccgtcagctgaacaacaacccagggactccg
tggggccgggagcggagacccatcgtggagtttgcaatcgacaacgttaaggttctcaag
aagatcgagcacttgagggaaaagaccaaggcccggcagcagcagcagcaggggcagcag
gagaacggagacatggccaacggcggcggcggaagaagcgacagaagcggcagcagagga
aaaaagggtctcgaaggaaagggggcgccggctcgtgccggggtggtggaggaggaggag
gaggggggggcggatacacagccgacggtagcggcggacaagaagggcaagaagggcaag
aaggcaaagactacgggggcggccagaggggaggaggaggaagcggaggaggaggcggac
gctgacggcggcgcgggtggggacggtacggcactatcgcagcggcagcggaaacgccag
cggcagaaggagcgcgtggagcgcaagaaggcgctgctcaaggagggcggcgtgcaggcg
ctcgtggaggcggtggaggtggaccggaaacagcgccagcaggcgggtgatgggtgggcg
tatggtggtggtgctgctgtcggaggaggtggagggaaaggccagactgccaaagggagc
cagcccaggaaagtgaccccgtcccagcagcagcagcagcagcggcaccaaccgcagcag
cggaagcggaaggctgaagaagaggatctcgatcgcatcgcgcgagaaggcctggcggcg
gaggcggcggcgcgagggggtgatgccgccgccaagcgccggcgacgtggtggcaaggtc
gcgggtgaggagggcgagggcggcggcgaccgcttagatcgcttggtggaacaataccgc
gcaaagctgtcgggcgagcggcccaagacgaaaatttcagattcaaattcaaatgcctcg
aaagcgggcggcagaggaggcggtagggggggaaaaaaaggcggccccaaaggcagcggc
aaaggcgacacggcaaaggcggcaaagggttccggagccaaggccggcggtggcaggggc
gatgggagctctggaaatgtggccgcgttggttgcgggagcggcgtctgggggcctgcgc
cgctggttcgatgggtaa

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