Volvox carteri f. nagariensis: VOLCADRAFT_87888
Help
Entry
VOLCADRAFT_87888 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_87888
Enzymes [BR:
vcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VOLCADRAFT_87888
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VOLCADRAFT_87888
Prokaryotic type
VOLCADRAFT_87888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
FAM165
Motif
Other DBs
NCBI-GeneID:
9620691
NCBI-ProteinID:
XP_002947729
JGI:
87888
UniProt:
D8TMI2
LinkDB
All DBs
Position
Unknown
AA seq
115 aa
AA seq
DB search
MPNVGLLLLLLLLLVLLLAFAYVGGQKLYQLAREGQSLELPARPVTISSLRVWRSETNPQ
EVNFYVACSKGTYIRSLAYDMGRALGTAAHLVALRREAPYKASRQAGHGGSWEGC
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgtgggcctgctgctgctgctgctactactgctcgttctgctcctcgctttt
gcttacgtgggcggtcagaagttgtaccagttggcgagggaggggcagagcttggagctg
ccggcgcggccggtcaccatcagcagcctgcgggtgtggcgctcagagacaaatccgcaa
gaagtgaacttttacgtggcgtgcagcaaggggacgtacattcggtccctggcgtacgac
atgggacgagcgttgggtacggcagcgcatctggttgcgctgcgccgcgaggcgccttac
aaggcctccaggcaggcgggccatggagggagctgggagggctgctag
DBGET
integrated database retrieval system