KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_87888
Entry
VOLCADRAFT_87888  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcn03016]
    VOLCADRAFT_87888
Enzymes [BR:vcn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     VOLCADRAFT_87888
Transfer RNA biogenesis [BR:vcn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VOLCADRAFT_87888
 Prokaryotic type
    VOLCADRAFT_87888
SSDB
Motif
Pfam: TruB_N TruB_C_2 FAM165
Other DBs
NCBI-GeneID: 9620691
NCBI-ProteinID: XP_002947729
JGI: 87888
UniProt: D8TMI2
LinkDB
Position
Unknown
AA seq 115 aa
MPNVGLLLLLLLLLVLLLAFAYVGGQKLYQLAREGQSLELPARPVTISSLRVWRSETNPQ
EVNFYVACSKGTYIRSLAYDMGRALGTAAHLVALRREAPYKASRQAGHGGSWEGC
NT seq 348 nt   +upstreamnt  +downstreamnt
atgccaaatgtgggcctgctgctgctgctgctactactgctcgttctgctcctcgctttt
gcttacgtgggcggtcagaagttgtaccagttggcgagggaggggcagagcttggagctg
ccggcgcggccggtcaccatcagcagcctgcgggtgtggcgctcagagacaaatccgcaa
gaagtgaacttttacgtggcgtgcagcaaggggacgtacattcggtccctggcgtacgac
atgggacgagcgttgggtacggcagcgcatctggttgcgctgcgccgcgaggcgccttac
aaggcctccaggcaggcgggccatggagggagctgggagggctgctag

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