Volvox carteri f. nagariensis: VOLCADRAFT_87889
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Entry
VOLCADRAFT_87889 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_87889
Enzymes [BR:
vcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VOLCADRAFT_87889
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VOLCADRAFT_87889
Prokaryotic type
VOLCADRAFT_87889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
DUF6626
TMEM119
Motif
Other DBs
NCBI-GeneID:
9620692
NCBI-ProteinID:
XP_002947730
JGI:
87889
UniProt:
D8TMI3
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
MPAETAEGVESRDRTSEASTSNGVDPGFAPSNTPVITPKSKRVSPTSLKPGAIEDVNILQ
NGVILVDKPLGWTSFDVCAKIRNLLKFIGVKKVGHAGTLDPHATGLLIVCTGRGTKFCDD
FMAQDKEYSGTMRLGEGTASYDAECEVTERLPWEHVTGKLKMKQWLKKPRWRIAG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggaaaccgctgagggcgtcgagtcacgcgaccgtacgtctgaggcctcgaca
tccaatggtgttgacccaggtttcgcccccagcaatacccccgtgatcacaccgaaatct
aaacgtgtatcaccgactagcttaaagcctggggcaatcgaggacgtcaacatacttcag
aacggagtcatccttgtggataagcctcttggttggacgagttttgacgtctgcgccaag
attcgcaacctgctcaagttcataggcgtcaaaaaggtcggtcacgccgggacactagac
ccccacgctactggactactgatcgtgtgcacgggccgcggcaccaagttctgtgacgat
ttcatggcacaggacaaggaatactcaggcacgatgcggctgggagagggtacggcgtcg
tacgacgccgagtgcgaggtcacggagcggttaccttgggagcacgtgacaggcaagtta
aagatgaagcagtggctgaagaagccccgatggaggattgcggggtag
DBGET
integrated database retrieval system