Volvox carteri f. nagariensis: VOLCADRAFT_88650
Help
Entry
VOLCADRAFT_88650 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03020
RNA polymerase
vcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VOLCADRAFT_88650
09124 Replication and repair
03420 Nucleotide excision repair
VOLCADRAFT_88650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_88650
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_88650
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
VOLCADRAFT_88650
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VOLCADRAFT_88650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
9624372
NCBI-ProteinID:
XP_002948375
JGI:
88650
UniProt:
D8TPK6
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MVFELKNTDVSSANALRRVMIAEVPTIAIDLVEMENNTTVLNDEFLAHRLGLLPLVSTEA
VAWKRPFEWSNDADMIETAFSLDVTCTVDGVMDVTSNDLVPLNPEHGVFPVNYQNPDEKP
IVICKMRRGQQLKLVARARKGIGKDHAKFIPVATAVFQYKPRIVLSHSAMAEMTDEEKQI
FVHSDPSKTFKFNPITRMIEVENEEAYMYDEECLVKARELGRPDLVTITQLQDHFIFRVE
GTGVLRVADIVRQPLAATSVAAAAVEAPPSQN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgagcttaagaatacagatgttagctcagcaaacgcgctgcggcgcgttatg
attgcagaggtgccgacaattgccatagatctcgtcgaaatggagaacaacacaactgta
ctaaacgacgagttcctggcacatcgccttgggttacttcctttggtttcaacggaggct
gtggcgtggaaacggccgttcgagtggagcaacgacgcggacatgattgaaaccgcgttc
tcgctggacgtgacgtgcactgttgatggcgtcatggacgtcacaagcaatgatttggta
ccgcttaacccggagcatggggtgttcccggtcaactaccagaaccctgacgaaaaaccc
atcgtcatttgcaaaatgcgtcggggccagcaactcaagctcgttgcacgagcacgcaag
gggatcgggaaagaccacgccaagtttatccccgtcgcgacggccgtgttccagtacaag
ccccgcattgtgctctctcacagcgccatggcagagatgaccgacgaggagaagcagatc
ttcgtccacagcgacccatcaaagacattcaaattcaaccccattactcggatgattgag
gtggagaacgaggaggcctatatgtacgacgaggagtgcttggttaaggcgcgggagctg
ggtcggccggacctggtcacgattacgcagctacaagaccatttcatcttcagggtggag
ggcacgggagtgttacgagtcgcagacattgtacgacagccattagcagcaacatcagta
gcagcggcagcagtagaagcgccaccatcgcaaaattaa
DBGET
integrated database retrieval system