KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_88650
Entry
VOLCADRAFT_88650  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03020  RNA polymerase
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VOLCADRAFT_88650
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_88650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_88650
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_88650
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     VOLCADRAFT_88650
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VOLCADRAFT_88650
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 9624372
NCBI-ProteinID: XP_002948375
JGI: 88650
UniProt: D8TPK6
LinkDB
Position
Unknown
AA seq 272 aa
MVFELKNTDVSSANALRRVMIAEVPTIAIDLVEMENNTTVLNDEFLAHRLGLLPLVSTEA
VAWKRPFEWSNDADMIETAFSLDVTCTVDGVMDVTSNDLVPLNPEHGVFPVNYQNPDEKP
IVICKMRRGQQLKLVARARKGIGKDHAKFIPVATAVFQYKPRIVLSHSAMAEMTDEEKQI
FVHSDPSKTFKFNPITRMIEVENEEAYMYDEECLVKARELGRPDLVTITQLQDHFIFRVE
GTGVLRVADIVRQPLAATSVAAAAVEAPPSQN
NT seq 819 nt   +upstreamnt  +downstreamnt
atggtatttgagcttaagaatacagatgttagctcagcaaacgcgctgcggcgcgttatg
attgcagaggtgccgacaattgccatagatctcgtcgaaatggagaacaacacaactgta
ctaaacgacgagttcctggcacatcgccttgggttacttcctttggtttcaacggaggct
gtggcgtggaaacggccgttcgagtggagcaacgacgcggacatgattgaaaccgcgttc
tcgctggacgtgacgtgcactgttgatggcgtcatggacgtcacaagcaatgatttggta
ccgcttaacccggagcatggggtgttcccggtcaactaccagaaccctgacgaaaaaccc
atcgtcatttgcaaaatgcgtcggggccagcaactcaagctcgttgcacgagcacgcaag
gggatcgggaaagaccacgccaagtttatccccgtcgcgacggccgtgttccagtacaag
ccccgcattgtgctctctcacagcgccatggcagagatgaccgacgaggagaagcagatc
ttcgtccacagcgacccatcaaagacattcaaattcaaccccattactcggatgattgag
gtggagaacgaggaggcctatatgtacgacgaggagtgcttggttaaggcgcgggagctg
ggtcggccggacctggtcacgattacgcagctacaagaccatttcatcttcagggtggag
ggcacgggagtgttacgagtcgcagacattgtacgacagccattagcagcaacatcagta
gcagcggcagcagtagaagcgccaccatcgcaaaattaa

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