Volvox carteri f. nagariensis: VOLCADRAFT_88908
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Entry
VOLCADRAFT_88908 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcn04040
]
VOLCADRAFT_88908
Ion channels [BR:
vcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
VOLCADRAFT_88908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TPR_26
Motif
Other DBs
NCBI-GeneID:
9624947
NCBI-ProteinID:
XP_002948622
JGI:
88908
UniProt:
D8TQA0
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MDAALPVMLPTDSVRIGWSIWTLLLMLYTAVAVPLMIAFHSFRRVIFAHVMGIITFASFR
TAYMTERGEVVRTPRLIAVQYTTRGMFFADFLSALPVEVVLGFTHTGSATTNLYWLSILK
LPRLFLLMRHLTILTPVRYENLASVARLVLIMLLVTHWAACLWYYLYIQVPGRPWMFNVH
CISWTEWERYQHAFYKSFLMILGDRPDTYNNVERIFSIALLSMGACIYAVVVSSMTLLVG
NMWGMASRHKQRAIMLQDALRYTGARANDSVRAKVQAYFSHMVQHDHPGPEGVNFLSELP
AALHAEVLSSVFEPLLTRVQLFTVCEQPFIWRLARQLRLILFMPRAVIYEEGSVGHEMFV
IWRGAVALVGPSDGCMTALLTDGDHFGELGVMTSNLPRPHMAVALRPTDVMVLSKSDLHQ
QQQQRDQIRLACLITSLSTQPKHARHIMAGAASCGGPLCESTEPGLTQPSTSSEGSIGGR
RRSWRWSDSSVDSLFSAMFANRHGSCGAEPQPAASDDRMSAVRPSVPYVMPYKRQPSAST
HYLSPVEPPALSRAAVGPVASAATVTSAAVTPLSNSKNSQRRSATGFGNKQRRSATGFER
SATGLSTKSQQKSTGGFAGNRTGDLSVHSSRPLISSPLPNSVASAVAAISKKLHSPQLNP
HSHSNSRSPLALPYHSRLRRGLQEALSAMDCDDDVSGNGGSGGAIGRFITSAQEGPLDPN
ADRAPALDGRRVAGGRRSSTCSLTSGGDAFAPHPLLVLAPQPFIGLDPALVERDDSAKMA
PLNRTGSRHRARVPLEASATDEEEDAEEACVPAAARKNHSWSPTVANRRGGLPACRNSAS
HIGAISSCGRVPSDTGFFSRERVIQQQGWVEDRTGNFGSSSGGGGGGSGGGGDIRVAVLE
QQLAAVRQQLEESQAHSAMIMENPLMFPAIRAAMQKEIDSMVAQLRSQTDATLQRVLDML
KGLANRTEEVCQQAVVLEDRVRWLEGEWDGLQPPHDTVAATVGMSIGMDRVSMSGRSGTL
LLGSVPAGREGRSSDGRSGTIGNAASSSLAPAGKTQGVPSGQQQLGLLLPLSMLTASTES
ISGRSVYADGSSASKRSLIASHNQLSNRQRHAASVAAYDFQMPDESRGEPPDLLLPPPPL
RTGESAASAAALGAAAAPPPQPPQPPPQPPLLGGCKLRLQHVPGLAGRIEDSLWLASQGG
RSNGCRA
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggctttgccggtcatgctaccgacagactcggtcaggattgggtggtccatc
tggacgctgctgttgatgctgtacactgccgtcgctgtgccgctgatgatcgcctttcac
tccttccgacgagtgattttcgcgcatgtcatgggtatcataacattcgcatcttttagg
actgcgtacatgacggagcgaggtgaggtggtgcggacgccacggttgattgccgtgcaa
tacaccacccgcggtatgttttttgcggacttcctgtcggcactcccggttgaagtggtg
ctaggattcacccataccgggagcgccacgacgaacctctactggctaagcatcctgaaa
ctgcctcgcctgttcctgctcatgcggcacctcaccattttgacacccgtgagatacgag
aaccttgctagcgtggcacggctggtgctcatcatgctgctggtgacgcactgggcggcc
tgcctctggtactacctttacattcaggttccagggcggccgtggatgttcaacgtccac
tgtatatcgtggactgaatgggaaaggtaccaacatgcgttttacaagtccttcctgatg
atcctcggtgaccgccccgacacatataacaacgttgagcgcatcttttccatcgcgctg
ctctccatgggtgcttgcatatacgccgttgtcgtgagcagtatgacgcttctggtgggt
aatatgtggggcatggcctcgcgccacaagcagagggccataatgctacaagacgcgctg
aggtacactggagcacgcgccaacgattcagtccgcgccaaagtccaggcgtacttctcg
cacatggtacagcatgatcaccccggccccgaaggtgttaatttcctgtctgagctgccc
gccgccttgcatgccgaggtgctctcgtcagtgtttgagccattgctgacacgggtccag
ttgtttaccgtttgcgaacagcccttcatctggaggctcgcacggcagctgcgcctcatt
ttgtttatgccacgtgccgtcatttacgaagagggtagtgtagggcacgagatgttcgtc
atctggcgcggtgccgtggcgcttgtgggtccgtcagacggctgcatgaccgcgctgctg
accgacggtgaccacttcggggagctgggggtcatgacctccaacctgccgcggccgcac
atggccgttgcgcttcgcccgacggacgtcatggtcctcagtaagagcgacttgcaccag
cagcagcagcagcgggatcagattcgccttgcgtgccttatcacaagcctttccactcag
ccgaagcatgctcgtcatattatggcaggtgccgcatcctgtggcgggcccttgtgcgag
tccactgagccgggccttacacaaccgagcacctcctccgaggggtctattggagggcgg
agacgcagctggagatggagtgactcttcagtggactccctcttctcggcaatgttcgcc
aacaggcatgggagctgtggtgccgagccgcagccagcagcatcggatgatcgaatgtct
gccgtacggccttccgtaccatacgtgatgccgtacaaacgacaaccgtcagctagcact
cattatcttagtccagttgagccacccgcactttcacgcgcagcagtggggcctgtagca
tcggcggctactgttacatcagcggcggtgacaccgttatcaaacagcaagaacagccag
cgcaggagcgcaactggattcggtaacaaacaacgacggagtgctacgggattcgaacgg
agcgctacgggattgtctactaaaagccaacaaaaaagcactggcgggtttgccgggaac
agaactggagacctttcggtgcactccagccgtccactgatctcctcacccttacccaac
agtgtcgcctctgcggtcgccgctattagcaaaaaattacactctcctcaactaaaccca
cattcccactcaaattcccgctcacctttagcgctgccgtaccatagccgccttcgacgc
ggcctccaagaggcgctctcagcgatggactgtgatgacgacgtcagcggcaacggcggc
agcggcggcgcgatcgggcgttttattaccagcgcacaggagggccccttagaccccaat
gccgacagagcgccggctctggacggtcgccgcgtcgccggcggccgccgctcctccacc
tgctcattaacctcggggggagatgcctttgcgcctcatccgctgctggtgctggccccg
cagccttttatcggcctggaccctgcgctagttgagagagatgattcagcgaaaatggcg
ccattgaataggaccgggtcgcgccaccgagctcgggtccctctggaagcatcggcgacg
gacgaagaggaggacgcagaagaagcatgcgttcccgcggccgcacgtaagaaccactcc
tggagcccaaccgtcgctaaccgccgagggggacttccagcctgtaggaactctgcctct
catattggggccatctccagctgcggcagagtgccttcagacaccggcttcttctcccgc
gagcgagtcattcagcagcagggctgggtggaggacagaacggggaatttcggcagcagc
agcggaggcggaggcggcggcagcggcggcggcggtgacatacgggtggcggtgctagag
cagcagctggcggcggtacggcagcagcttgaggagtcccaggcgcattcggcgatgatc
atggagaacccgctcatgtttcctgctatccgagctgccatgcaaaaagaaatcgacagc
atggtggcccagctgcgctcccaaacggatgccaccttgcagcgggtgcttgacatgctc
aaggggctcgcaaaccgtacagaggaggtctgtcagcaagccgtggtgctagaggaccgg
gtgcgttggctcgagggagagtgggacggtctccagccgccgcacgacacggtagcggcc
accgtgggaatgagcatcggcatggacagggtgagcatgagcggacgcagcggcaccctc
ctcctgggcagcgtccctgcgggccgggaaggccgcagctcggatggtcggtctgggaca
atcggcaacgccgcgtcgtcgtccctagccccggcgggtaaaacacagggcgtgccatcc
ggccagcagcagctaggtctgttgctgccgctttccatgctgacggcatcaacggaaagc
atcagtggtcgctcggtctatgcagacggcagcagcgcctccaaacgctccctcattgca
tctcacaaccagctgtcgaaccgccagcgccacgccgcctccgtggcggcgtacgacttc
cagatgcccgatgagtcccggggcgagcccccggacctgctgctgccgccgccgccgctg
cgcaccggagagtctgctgcgtccgcggcggcgctgggtgctgcggccgcgccgcctccg
caacctccacaacctcctccgcaacctccactcctaggcggctgcaagcttcggctgcag
cacgtgccagggctagccggccgtatcgaggatagcctgtggctggccagccaaggagga
cgatcaaacggttgtagagcttga
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integrated database retrieval system