Volvox carteri f. nagariensis: VOLCADRAFT_89085
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Entry
VOLCADRAFT_89085 CDS
T01330
Symbol
syp1
Name
(RefSeq) Qa-SNARE, Sso1/Syntaxin1-type
KO
K08486
syntaxin 1B/2/3
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
VOLCADRAFT_89085 (syp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_89085 (syp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcn04147
]
VOLCADRAFT_89085 (syp1)
Membrane trafficking [BR:
vcn04131
]
SNARE
Syntaxin (Qa)
Stx-PM
VOLCADRAFT_89085 (syp1)
Exosome [BR:
vcn04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
VOLCADRAFT_89085 (syp1)
Exosomal proteins of other body fluids (saliva and urine)
VOLCADRAFT_89085 (syp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
CwsA
CDP-OH_P_tran_2
Motif
Other DBs
NCBI-GeneID:
9627387
NCBI-ProteinID:
XP_002948820
JGI:
89085
UniProt:
D8TQR6
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MTDLLGAVKGKSAIYQGMEDDPDIDDIEDQVAPPPTDAEREMQEFFKRIEQIKLDLAAIK
DLQKEVLSMHERGKTIVKSKEMQKHPQDNLLGYPVLKQQMFSTFPRLDFSLQDKINEVNK
LAHAAKAKIEALDKENEAAKKRKGQGQGTASERTRTTITAGLKKKLKDHMQEFSDLRSRI
QSEYREIVERRVYTVTGQHVDEEEIDRMIENGDSENIFQKAILEQGRGRVLDTLAEIQER
HRAVKVLEQSLLELHQIFLDMAVLVEAQGEMLDNIEKQVARSVDYVKGGTEALQDAKQLQ
KNTRKWMCCAIMIMLIVALVIVLAVVRPWRYLQK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttgttaggtgctgtcaagggcaagagtgcaatttaccaaggcatggaagat
gaccctgatattgacgacattgaggaccaggtcgcccctccaccgacagatgcggagagg
gaaatgcaggagtttttcaagcggattgagcagattaaactggaccttgcggccattaag
gacttgcagaaggaagtcctcagcatgcacgagaggggcaagacaatcgtgaagtccaag
gaaatgcagaagcatccccaggataaccttctaggctaccccgtattgaaacaacagatg
ttctcaactttccctcggcttgacttctctctgcaggacaaaataaacgaggtcaacaag
ctggcccacgcagcgaaggcaaaaatcgaggcccttgataaggaaaacgaagccgccaag
aagaggaagggacaggggcaaggcaccgcctctgagcgcacccgcaccacgattacggca
ggtcttaaaaagaagctcaaggaccacatgcaggagttttcggatctacggtctcgtatc
cagtctgaataccgggagatcgtcgaacggcgggtgtacacggtgacaggtcagcatgtg
gacgaggaggagattgaccgcatgattgagaacggcgactccgaaaatatatttcagaag
gcgattttagaacagggccgtggccgtgttttggatacattggctgagattcaggagcgc
caccgcgccgtgaaggtcttggagcagtcgttgctggagctgcatcagatatttctggat
atggccgtgttagtggaggctcagggggagatgctggacaacatcgagaagcaggtggct
cgctctgtggactacgtcaagggtggcacggaggcgctgcaggacgccaagcagctacag
aagaacactcgcaagtggatgtgttgtgccatcatgatcatgctaatcgtagcgttggtc
atagtgctggccgtggtgcggccctggcggtacctgcagaagtag
DBGET
integrated database retrieval system